Principles and challenges of genome-wide DNA methylation analysis

PW Laird - Nature Reviews Genetics, 2010 - nature.com
Methylation of cytosine bases in DNA provides a layer of epigenetic control in many
eukaryotes that has important implications for normal biology and disease. Therefore …

Genomic patterns of DNA methylation: targets and function of an epigenetic mark

M Weber, D Schübeler - Current opinion in cell biology, 2007 - Elsevier
Methylation of cytosines can mediate epigenetic gene silencing and is the only known DNA
modification in eukaryotes. Recent efforts to map DNA methylation across mammalian …

Mitochondrial DNA methylation as a next-generation biomarker and diagnostic tool

V Iacobazzi, A Castegna, V Infantino… - Molecular genetics and …, 2013 - Elsevier
Recent expansion of our knowledge on epigenetic changes strongly suggests that not only
nuclear DNA (nDNA), but also mitochondrial DNA (mtDNA) may be subjected to epigenetic …

[HTML][HTML] Basic concepts of epigenetics

M Inbar-Feigenberg, S Choufani, DT Butcher… - Fertility and sterility, 2013 - Elsevier
Several types of epigenetic marks facilitate the complex patterning required for normal
human development. These epigenetic marks include DNA methylation at CpG …

Helicobacter pylori causes epigenetic dysregulation of FOXD3 to promote gastric carcinogenesis

ASL Cheng, MS Li, W Kang, VY Cheng, JL Chou… - Gastroenterology, 2013 - Elsevier
BACKGROUND & AIMS: Deregulation of forkhead box (Fox) proteins, an evolutionarily
conserved family of transcriptional regulators, leads to tumorigenesis. Little is known about …

Strategies for discovery and validation of methylated and hydroxymethylated DNA biomarkers

E Olkhov‐Mitsel, B Bapat - Cancer medicine, 2012 - Wiley Online Library
DNA methylation, consisting of the addition of a methyl group at the fifth‐position of cytosine
in a CpG dinucleotide, is one of the most well‐studied epigenetic mechanisms in mammals …

[HTML][HTML] DNA methylation in breast and colorectal cancers

A Agrawal, RF Murphy, DK Agrawal - Modern Pathology, 2007 - Elsevier
DNA methylation is one of several epigenetic changes observed in cells. Aberrant
methylation of tumor suppressor genes, proto-oncogenes, and vital cell cycle genes has led …

Epigenetics and obesity

J Campión, F Milagro, JA Martínez - Progress in molecular biology and …, 2010 - Elsevier
The etiology of obesity is multifactorial, involving complex interactions among the genetic
makeup, neuroendocrine status, fetal programming, and different unhealthy environmental …

Laboratory methods to decipher epigenetic signatures: a comparative review

R Halabian, V Arshad, A Ahmadi, P Saeedi… - Cellular & Molecular …, 2021 - Springer
Epigenetics refers to nucleotide sequence-independent events, and heritable changes,
including DNA methylation and histone modification (as the two main processes) …

Genome‐wide DNA methylation profiling

M Bibikova, JB Fan - Wiley Interdisciplinary Reviews: Systems …, 2010 - Wiley Online Library
DNA methylation plays a critical role in the regulation of gene expression. The ability to
access the methylation status for a large number of genes or the entire genome should …