Bathyarchaeota: globally distributed metabolic generalists in anoxic environments

Z Zhou, J Pan, F Wang, JD Gu… - FEMS microbiology …, 2018 - academic.oup.com
Bathyarchaeota, formerly known as the Miscellaneous Crenarchaeotal Group, is a phylum of
global generalists that are widespread in anoxic sediments, which host relatively high …

Phylogenetic identification and in situ detection of individual microbial cells without cultivation

RI Amann, W Ludwig, KH Schleifer - Microbiological reviews, 1995 - Am Soc Microbiol
The frequent discrepancy between direct microscopic counts and numbers of culturable
bacteria from environmental samples is just one of several indications that we currently …

[PDF][PDF] Microbial biofilms

JW Costerton, Z Lewandowski, DE Caldwell… - 1995 - academia.edu
MICROBIAL BIOFILMS Page 1 A,lv Microbial. J 95. 49:7Jl-45 Coyrigt 0 J 95 by nul Reviws I,c. Al
rigts reseved MICROBIAL BIOFILMS J. William Costeton and Zbigniew Lewandowski Center fr …

A modular method for the extraction of DNA and RNA, and the separation of DNA pools from diverse environmental sample types

MA Lever, A Torti, P Eickenbusch, AB Michaud… - Frontiers in …, 2015 - frontiersin.org
A method for the extraction of nucleic acids from a wide range of environmental samples
was developed. This method consists of several modules, which can be individually …

Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations

RI Amann, BJ Binder, RJ Olson… - Applied and …, 1990 - Am Soc Microbiol
Fluorescent oligonucleotide hybridization probes were used to label bacterial cells for
analysis by flow cytometry. The probes, complementary to short sequence elements within …

Archaea in coastal marine environments.

EF DeLong - Proceedings of the National Academy of …, 1992 - National Acad Sciences
Archaea (archaebacteria) are a phenotypically diverse group of microorganisms that share a
common evolutionary history. There are four general phenotypic groups of archaea: the …

Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology

RI Amann, L Krumholz, DA Stahl - Journal of bacteriology, 1990 - Am Soc Microbiol
Fluorescent-dye-conjugated oligonucleotides were used to classify 14 Fibrobacter strains by
fluorescence microscopy. On the basis of partial 16S rRNA sequences of six Fibrobacter …

Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology

G Muyzer, K Smalla - Antonie van Leeuwenhoek, 1998 - Springer
Here, the state of the art of the application of denaturing gradient gel electrophoresis
(DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology will be …

Phylogenetic oligodeoxynucleotide probes for the major subclasses of proteobacteria: problems and solutions

W Manz, R Amann, W Ludwig, M Wagner… - Systematic and applied …, 1992 - Elsevier
Based on comparative analyses of 16S and 23S ribosomal RNA sequences we have
located sites specific for the alpha-, beta-, and gamma-subclasses of Proteobacteria. Short …

Bias in template-to-product ratios in multitemplate PCR

MF Polz, CM Cavanaugh - Applied and environmental …, 1998 - Am Soc Microbiol
Bias introduced by the simultaneous amplification of specific genes from complex mixtures
of templates remains poorly understood. To explore potential causes and the extent of bias …