New nucleic acid testing devices to diagnose infectious diseases in resource-limited settings

P Maffert, S Reverchon, W Nasser, C Rozand… - European Journal of …, 2017 - Springer
Point-of-care diagnosis based on nucleic acid testing aims to incorporate all the analytical
steps, from sample preparation to nucleic acid amplification and detection, in a single …

CRISPR-guided DNA polymerases enable diversification of all nucleotides in a tunable window

SO Halperin, CJ Tou, EB Wong, C Modavi, DV Schaffer… - Nature, 2018 - nature.com
The capacity to diversify genetic codes advances our ability to understand and engineer
biological systems,. A method for continuously diversifying user-defined regions of a …

Custom-size, functional, and durable DNA origami with design-specific scaffolds

FAS Engelhardt, F Praetorius, CH Wachauf… - ACS …, 2019 - ACS Publications
DNA origami nano-objects are usually designed around generic single-stranded “scaffolds”.
Many properties of the target object are determined by details of those generic scaffold …

Efficient production of single-stranded phage DNA as scaffolds for DNA origami

B Kick, F Praetorius, H Dietz, D Weuster-Botz - Nano letters, 2015 - ACS Publications
Scaffolded DNA origami enables the fabrication of a variety of complex nanostructures that
promise utility in diverse fields of application, ranging from biosensing over advanced …

DNA-binding proteins essential for protein-primed bacteriophage Φ29 DNA replication

M Salas, I Holguera, M Redrejo-Rodríguez… - Frontiers in molecular …, 2016 - frontiersin.org
Bacillus subtilis phage Φ29 has a linear, double-stranded DNA 19 kb long with an inverted
terminal repeat of 6 nucleotides and a protein covalently linked to the 5′ ends of the DNA …

Circle-Seq: isolation and sequencing of chromosome-derived circular DNA elements in cells

HD Møller - DNA Electrophoresis: Methods and Protocols, 2020 - Springer
Chromosome-derived extrachromosomal circular DNA elements (eccDNAs) are detected in
all eukaryotes examined so far. Here I describe the Circle-Seq protocol, applicable for …

High-fidelity nanopore sequencing of ultra-short DNA targets

BD Wilson, M Eisenstein, HT Soh - Analytical chemistry, 2019 - ACS Publications
Nanopore sequencing offers a portable and affordable alternative to sequencing-by-
synthesis methods but suffers from lower accuracy and cannot sequence ultrashort DNA …

Selection of highly specific aptamers to Vibrio parahaemolyticus using cell-SELEX powered by functionalized graphene oxide and rolling circle amplification

S Song, X Wang, K Xu, Q Li, L Ning, X Yang - Analytica chimica acta, 2019 - Elsevier
Cell-SELEX is a powerful tool to screen aptamers binding to living cellular organisms such
as bacteria, fungi and even oncocytes. Here, we developed an advanced cell-SELEX …

An experimental strategy for preparing circular ssDNA virus genomes for next-generation sequencing

CD Aimone, JS Hoyer, AE Dye, DO Deppong… - Journal of Virological …, 2022 - Elsevier
The ability of begomoviruses to evolve rapidly threatens many crops and underscores the
importance of detecting these viruses quickly and to understand their genome diversity. This …

DNA-catalyzed efficient production of single-stranded DNA nanostructures

Y Jia, L Chen, J Liu, W Li, H Gu - Chem, 2021 - cell.com
Single-stranded (ss) DNA nanostructures (DNs), created by unimolecular folding of kilo-
based ssDNA, represent a new class of DNA constructs suitable for biomaterial and …