How do nucleosome dynamics regulate protein search on DNA?

SK Mishra, A Bhattacherjee - The Journal of Physical Chemistry B, 2023 - ACS Publications
Nearly three-fourths of all eukaryotic DNA is occupied by nucleosomes, protein–DNA
complexes comprising octameric histone core proteins and∼ 150 base pairs of DNA. In …

smFRET Detection of Cis and Trans DNA Interactions by the BfiI Restriction Endonuclease

S Ivanovaitė, J Paksaitė, A Kopu̅stas… - The Journal of …, 2023 - ACS Publications
Protein–DNA interactions are fundamental to many biological processes. Proteins must find
their target site on a DNA molecule to perform their function, and mechanisms for target …

Efficient Image Feature Extraction through Simultaneous Training of Nested U-Nets

SK Mishra, DW Heermann - 2023 9th International Conference …, 2023 - ieeexplore.ieee.org
In the last few decades, coarse-graining emerged as a tool in various fields to optimize the
speed-accuracy complexity of a system and extract prominent features from it. But, in the …