Soil protists: a fertile frontier in soil biology research

S Geisen, EAD Mitchell, S Adl… - FEMS microbiology …, 2018 - academic.oup.com
Protists include all eukaryotes except plants, fungi and animals. They are an essential, yet
often forgotten, component of the soil microbiome. Method developments have now …

Protist metabarcoding and environmental biomonitoring: time for change

J Pawlowski, F Lejzerowicz… - European Journal of …, 2016 - Elsevier
High-throughput amplicon sequencing of environmental DNA and/or RNA proved to be a
powerful tool to describe protist diversity. This new approach called also the metabarcoding …

Blind spots in global soil biodiversity and ecosystem function research

CA Guerra, A Heintz-Buschart, J Sikorski… - Nature …, 2020 - nature.com
Soils harbor a substantial fraction of the world's biodiversity, contributing to many crucial
ecosystem functions. It is thus essential to identify general macroecological patterns related …

[HTML][HTML] Development of a new pan-European testate amoeba transfer function for reconstructing peatland palaeohydrology

MJ Amesbury, GT Swindles, A Bobrov… - Quaternary Science …, 2016 - Elsevier
In the decade since the first pan-European testate amoeba-based transfer function for
peatland palaeohydrological reconstruction was published, a vast amount of additional data …

Distribution patterns of soil microbial eukaryotes suggests widespread algivory by phagotrophic protists as an alternative pathway for nutrient cycling

CVW Seppey, D Singer, K Dumack, B Fournier… - Soil Biology and …, 2017 - Elsevier
High-throughput sequencing (HTS) of soil environmental DNA (eDNA) allows assessing the
full diversity of soil micro-eukaryotes. The resulting operational taxonomic units (OTUs) can …

The utility of macroecological rules for microbial biogeography

JR Dickey, RA Swenie, SC Turner… - Frontiers in Ecology …, 2021 - frontiersin.org
Macroecological rules have been developed for plants and animals that describe large-
scale distributional patterns and attempt to explain the underlying physiological and …

Changes in trophic groups of protists with conversion of rainforest into rubber and oil palm plantations

G Schulz, D Schneider, N Brinkmann, N Edy… - Frontiers in …, 2019 - frontiersin.org
Protists, abundant but enigmatic single-celled eukaryotes, are important soil microbiota
providing numerous ecosystem functions. We employed high-throughput sequencing of …

Phylogenomics and morphological reconstruction of Arcellinida testate amoebae highlight diversity of microbial eukaryotes in the Neoproterozoic

DJG Lahr, A Kosakyan, E Lara, EAD Mitchell, L Morais… - Current Biology, 2019 - cell.com
Life was microbial for the majority of Earth's history, but as very few microbial lineages leave
a fossil record, the Precambrian evolution of life remains shrouded in mystery. Shelled …

On the phenology of soil organisms: Current knowledge and future steps

AE Bonato Asato, C Wirth, N Eisenhauer… - Ecology and …, 2023 - Wiley Online Library
Phenology is the study of timing of periodic activities in biological life cycles. It describes an
inherent component of ecosystem dynamics, and shifts in biological activity have been …

Environmental filtering and phylogenetic clustering correlate with the distribution patterns of cryptic protist species

D Singer, A Kosakyan, CVW Seppey, A Pillonel… - Ecology, 2018 - Wiley Online Library
The community composition of any group of organisms should theoretically be determined
by a combination of assembly processes including resource partitioning, competition …