Nucleosome remodeling and epigenetics

PB Becker, JL Workman - Cold Spring Harbor …, 2013 - cshperspectives.cshlp.org
Eukaryotic chromatin is kept flexible and dynamic to respond to environmental, metabolic,
and developmental cues through the action of a family of so-called “nucleosome …

Chromatin dynamics: interplay between remodeling enzymes and histone modifications

SG Swygert, CL Peterson - Biochimica et Biophysica Acta (BBA)-Gene …, 2014 - Elsevier
Chromatin dynamics play an essential role in regulating the accessibility of genomic DNA for
a variety of nuclear processes, including gene transcription and DNA repair. The …

Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange

M Smolle, S Venkatesh, MM Gogol, H Li… - Nature structural & …, 2012 - nature.com
Set2-mediated methylation of histone H3 Lys36 (H3K36) is a mark associated with the
coding sequences of actively transcribed genes, but it has a negative role during …

Combinatorial complexity in chromatin structure and function: revisiting the histone code

OJ Rando - Current opinion in genetics & development, 2012 - Elsevier
Covalent modifications of histone proteins play key roles in transcription, DNA repair,
recombination, and other such processes. Over a hundred histone modifications have been …

[HTML][HTML] CHD1 loss alters AR binding at lineage-specific enhancers and modulates distinct transcriptional programs to drive prostate tumorigenesis

MA Augello, D Liu, LD Deonarine, BD Robinson… - Cancer Cell, 2019 - cell.com
Deletion of the gene encoding the chromatin remodeler CHD1 is among the most common
alterations in prostate cancer (PCa); however, the tumor-suppressive functions of CHD1 and …

Balancing chromatin remodeling and histone modifications in transcription

E Petty, L Pillus - Trends in Genetics, 2013 - cell.com
Chromatin remodelers use the energy of ATP hydrolysis to reposition or evict nucleosomes
or to replace canonical histones with histone variants. By regulating nucleosome dynamics …

CHD chromatin remodelers and the transcription cycle

M Murawska, A Brehm - Transcription, 2011 - Taylor & Francis
It is well established that ATP-dependent chromatin remodelers modulate DNA access of
transcription factors and RNA polymerases by" opening" or" closing" chromatin structure …

TDP-43 promotes neurodegeneration by impairing chromatin remodeling

A Berson, A Sartoris, R Nativio, V Van Deerlin… - Current Biology, 2017 - cell.com
Regulation of chromatin structure is critical for brain development and function. However, the
involvement of chromatin dynamics in neurodegeneration is less well understood. Here we …

The DNA‐binding domain of the Chd1 chromatin‐remodelling enzyme contains SANT and SLIDE domains

DP Ryan, R Sundaramoorthy, D Martin, V Singh… - The EMBO …, 2011 - embopress.org
The ATP‐dependent chromatin‐remodelling enzyme Chd1 is a 168‐kDa protein consisting
of a double chromodomain, Snf2‐related ATPase domain, and a C‐terminal DNA‐binding …

Structural biology of the chromodomain: form and function

JC Eissenberg - Gene, 2012 - Elsevier
The chromodomain motif is found among certain chromosomal proteins of all eukaryotes.
The chromodomain fold–three beta strands packed against a C-terminal alpha helix …