Metabolic engineering: methodologies and applications

MJ Volk, VG Tran, SI Tan, S Mishra, Z Fatma… - Chemical …, 2022 - ACS Publications
Metabolic engineering aims to improve the production of economically valuable molecules
through the genetic manipulation of microbial metabolism. While the discipline is a little over …

Bacterial two-component systems as sensors for synthetic biology applications

JT Lazar, JJ Tabor - Current Opinion in Systems Biology, 2021 - Elsevier
Two-component systems (TCSs) are a ubiquitous family of signal transduction pathways that
enable bacteria to sense and respond to physical, chemical, and biological stimuli outside …

Biosensor-enabled pathway optimization in metabolic engineering

Y Teng, J Zhang, T Jiang, Y Zou, X Gong… - Current opinion in …, 2022 - Elsevier
Microbes can convert inexpensive renewable substrates to valuable metabolites by their
natural metabolic pathways. To maximize the productivity, the pathways yet require further …

Optogenetics and biosensors set the stage for metabolic cybergenetics

C Carrasco-López, SA García-Echauri, T Kichuk… - Current opinion in …, 2020 - Elsevier
Highlights•Metabolic cybergenetics promises unprecedented real-time control of
fermentations.•Optogenetic regulators make ideal actuators for metabolic cybergenetics.• …

An optogenetic toolkit for light-inducible antibiotic resistance

MB Sheets, N Tague, MJ Dunlop - Nature Communications, 2023 - nature.com
Antibiotics are a key control mechanism for synthetic biology and microbiology. Resistance
genes are used to select desired cells and regulate bacterial populations, however their use …

Light-regulated gene expression in Bacteria: Fundamentals, advances, and perspectives

R Ohlendorf, A Möglich - Frontiers in Bioengineering and …, 2022 - frontiersin.org
Numerous photoreceptors and genetic circuits emerged over the past two decades and now
enable the light-dependent ie, optogenetic, regulation of gene expression in bacteria …

The promise of optogenetics for bioproduction: dynamic control strategies and scale-up instruments

S Pouzet, A Banderas, M Le Bec, T Lautier, G Truan… - Bioengineering, 2020 - mdpi.com
Progress in metabolic engineering and synthetic and systems biology has made
bioproduction an increasingly attractive and competitive strategy for synthesizing …

Optogenetics in bacteria–applications and opportunities

F Lindner, A Diepold - FEMS Microbiology Reviews, 2022 - academic.oup.com
Optogenetics holds the promise of controlling biological processes with superb temporal
and spatial resolution at minimal perturbation. Although many of the light-reactive proteins …

Coordinating precursor supply for pharmaceutical polyketide production in Streptomyces

S Li, Z Li, S Pang, W Xiang, W Wang - Current opinion in biotechnology, 2021 - Elsevier
Highlights•Polyketide precursor pathways are key biological entities for synthetic biology
driven strain improvement.•Diverse native and heterologous precursor pathways for …

Optogenetic control of gut bacterial metabolism to promote longevity

LA Hartsough, M Park, MV Kotlajich, JT Lazar, B Han… - Elife, 2020 - elifesciences.org
Gut microbial metabolism is associated with host longevity. However, because it requires
direct manipulation of microbial metabolism in situ, establishing a causal link between these …