High-throughput sequencing view on the magnitude of global fungal diversity

P Baldrian, T Větrovský, C Lepinay, P Kohout - Fungal Diversity, 2022 - Springer
High-throughput DNA sequencing has dramatically transformed several areas of biodiversity
research including mycology. Despite limitations, high-throughput sequencing is nowadays …

[HTML][HTML]  How, not if, is the question mycologists should be asking about DNA-based typification

RH Nilsson, M Ryberg, C Wurzbacher, L Tedersoo… - MycoKeys, 2023 - ncbi.nlm.nih.gov
 Abstract Fungal metabarcoding of substrates such as soil, wood, and water is uncovering
an unprecedented number of fungal species that do not seem to produce tangible …

[HTML][HTML]  Phylogenetic classification of arbuscular mycorrhizal fungi: new species and higher-ranking taxa in Glomeromycota and Mucoromycota (class …

L Tedersoo, F Magurno, S Alkahtani, V Mikryukov - MycoKeys, 2024 - pmc.ncbi.nlm.nih.gov
 Abstract Arbuscular mycorrhizal (AM) fungi-Glomeromycota and Endogonomycetes-
comprise multiple species and higher-level taxa that have remained undescribed. We …

[HTML][HTML] New light on names and naming of dark taxa

M Ryberg, RH Nilsson - MycoKeys, 2018 - ncbi.nlm.nih.gov
A growing proportion of fungal species and lineages are known only from sequence data
and cannot be linked to any physical specimen or resolved taxonomic name. Such fungi are …

[PDF][PDF] Unexpected high species diversity among European stalked puffballs–a contribution to the phylogeny and taxonomy of the genus Tulostoma (Agaricales)

M Jeppson, A Altes, G Moreno, RH Nilsson… - …, 2017 - mycokeys.pensoft.net
A three-gene data set was generated to explore species diversity and delimitations within
the stalked puffballs (Tulostoma, Agaricales) in Europe. Data on species from other parts of …

[HTML][HTML] Taxonomic annotation of public fungal ITS sequences from the built environment–a report from an April 10–11, 2017 workshop (Aberdeen, UK)

RH Nilsson, AFS Taylor, RI Adams, C Baschien… - MycoKeys, 2018 - ncbi.nlm.nih.gov
Recent DNA-based studies have shown that the built environment is surprisingly rich in
fungi. These indoor fungi–whether transient visitors or more persistent residents–may hold …

[HTML][HTML] Solving the taxonomic identity of Pseudotomentellatristis sl (Thelephorales, Basidiomycota)–a multi-gene phylogeny and taxonomic review, integrating …

S Svantesson, KH Larsson, U Kõljalg, TW May… - MycoKeys, 2019 - ncbi.nlm.nih.gov
P. tristis is an ectomycorrhizal, corticioid fungus whose name is frequently assigned to
collections of basidiomata as well as root tip and soil samples from a wide range of habitats …

Morphologic and molecular data help adopting the insect-pathogenic nephridiophagids (Nephridiophagidae) among the early diverging fungal lineages, close to the …

R Radek, C Wurzbacher, S Gisder, RH Nilsson… - 2017 - refubium.fu-berlin.de
Nephridiophagids are poorly known unicellular eukaryotes, previously of uncertain
systematic position, that parasitize the Malpighian tubules of insects. Their life cycle includes …

Fungi associated with fine roots of Fraxinus excelsior affected by ash dieback detected by next-generation sequencing

L Lysenko, E Griem, P Wagener, EJ Langer - Journal of Plant Diseases …, 2024 - Springer
The decline of European ash by dieback caused by Hymenoscyphus fraxineus together with
stem collar necroses and rots caused by various fungi has been investigated intensively …

Read quality-based trimming of the distal ends of public fungal DNA sequences is nowhere near satisfactory

RH Nilsson, M Sánchez-García, M Ryberg… - MycoKeys, 2017 - diva-portal.org
DNA sequences are increasingly used for taxonomic and functional assessment of
environmental communities. In mycology, the nuclear ribosomal internal transcribed spacer …