Synthetic biology in multicellular organisms: Opportunities in nematodes

D Kukhtar, M Fussenegger - Biotechnology and Bioengineering, 2023 - Wiley Online Library
Synthetic biology has mainly focused on introducing new or altered functionality in single
cell systems: primarily bacteria, yeast, or mammalian cells. Here, we describe the extension …

Modular safe-harbor transgene insertion for targeted single-copy and extrachromosomal array integration in Caenorhabditis elegans

S El Mouridi, F Alkhaldi, C Frøkjær-Jensen - G3, 2022 - academic.oup.com
Efficient and reproducible transgenesis facilitates and accelerates research using genetic
model organisms. Here, we describe a mo dular s afe-harbor t ransgene i nsertion (MosTI) …

Allopolyploidy expanded gene content but not pangenomic variation in the hexaploid oilseed Camelina sativa

KA Bird, JR Brock, PP Grabowski, AM Harder… - Genetics, 2025 - academic.oup.com
Myosin storage myopathy (MSM) is a rare skeletal muscle disorder caused by mutations in
the slow muscle/β-cardiac myosin heavy chain (MHC) gene. MSM missense mutations …

A versatile site-directed gene trap strategy to manipulate gene activity and control gene expression in Caenorhabditis elegans

H Khan, X Huang, V Raj, H Wang - PLoS genetics, 2025 - journals.plos.org
The ability to manipulate gene activity and control transgene expression is essential to study
gene function. While several genetic tools for modifying genes or controlling expression …

[HTML][HTML] Characterizing short germline-specific promoters with a range of expression levels in C. elegans

MD Aljohani, S El Mouridi… - microPublication …, 2023 - ncbi.nlm.nih.gov
A core tenet of synthetic biology is that well-characterized regulatory elements are essential
for engineering biological systems. Here, we characterize the specificity and expression …

A metazoan-specific C-terminal motif in EXC-4 and Gα-Rho/Rac signaling regulate cell outgrowth during tubulogenesis in C. elegans

AF Arena, J Escudero, DD Shaye - Development, 2022 - journals.biologists.com
Chloride intracellular channels (CLICs) are conserved proteins for which the cellular and
molecular functions remain mysterious. An important insight into CLIC function came from …

[HTML][HTML] Tools and methods for cell ablation and cell inhibition in Caenorhabditis elegans

D Rentsch, A Bergs, J Shao, N Elvers, C Ruse… - Genetics, 2024 - pmc.ncbi.nlm.nih.gov
To understand the function of cells such as neurons within an organism, it can be
instrumental to inhibit cellular function, or to remove the cell (type) from the organism, and …

[HTML][HTML] Characterizing a standardized BioPart for PVQ-specific expression in C. elegans

S AlHarbi, C Frøkjær-Jensen - microPublication biology, 2023 - ncbi.nlm.nih.gov
Synthetic biology relies on standardized biological parts (BioParts), and we aim to identify
cell-specific promoters for every class of neuron in C. elegans. Here, we characterize a short …

A defining member of the new cysteine-cradle family is an aECM protein signalling skin damage in C. elegans

T Sonntag, S Omi, A Andreeva, J Eichelbrenner… - bioRxiv, 2024 - biorxiv.org
The apical extracellular matrix acts as crucial barrier, and communicates with the epidermis
to trigger protective responses following injury or infection. In C. elegans, we previously …

Targeted and Random Transposon-Assisted Single-Copy Transgene Insertion in C. elegans

S El Mouridi, C Frøkjær-Jensen - C. elegans: Methods and Applications, 2022 - Springer
Transgenesis in model organisms is an essential tool for determining the function of protein-
coding genes and non-coding regulatory regions. In Caenorhabditis elegans, injected DNA …