[HTML][HTML] Genetic Mutations Associated with Isoniazid Resistance in Mycobacterium tuberculosis: A Systematic Review

M Seifert, D Catanzaro, A Catanzaro, TC Rodwell - PloS one, 2015 - journals.plos.org
Background Tuberculosis (TB) incidence and mortality are declining worldwide; however,
poor detection of drug-resistant disease threatens to reverse current progress toward global …

[HTML][HTML] Frequency and Geographic Distribution of gyrA and gyrB Mutations Associated with Fluoroquinolone Resistance in Clinical Mycobacterium Tuberculosis …

E Avalos, D Catanzaro, A Catanzaro, T Ganiats… - PloS one, 2015 - journals.plos.org
Background The detection of mutations in the gyrA and gyrB genes in the Mycobacterium
tuberculosis genome that have been demonstrated to confer phenotypic resistance to …

[HTML][HTML] Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis

P Bradley, NC Gordon, TM Walker, L Dunn… - Nature …, 2015 - nature.com
The rise of antibiotic-resistant bacteria has led to an urgent need for rapid detection of drug
resistance in clinical samples, and improvements in global surveillance. Here we show how …

Genetic Determinants of Drug Resistance in Mycobacterium tuberculosis and Their Diagnostic Value

MR Farhat, R Sultana, O Iartchouk… - American journal of …, 2016 - atsjournals.org
Rationale: The development of molecular diagnostics that detect both the presence of
Mycobacterium tuberculosis in clinical samples and drug resistance–conferring mutations …

Clinical implications of molecular drug resistance testing for Mycobacterium tuberculosis: a TBNET/RESIST-TB consensus statement

J Domínguez, EC Boettger, D Cirillo… - … of tuberculosis and …, 2016 - ingentaconnect.com
The emergence of drug-resistant strains of Mycobacterium tuberculosis is a challenge to
global tuberculosis (TB) control. Although culture-based methods have been regarded as …

[HTML][HTML] KvarQ: targeted and direct variant calling from fastq reads of bacterial genomes

A Steiner, D Stucki, M Coscolla, S Borrell, S Gagneux - BMC genomics, 2014 - Springer
Background High-throughput DNA sequencing produces vast amounts of data, with millions
of short reads that usually have to be mapped to a reference genome or newly assembled …

Novel katG mutations causing isoniazid resistance in clinical M. tuberculosis isolates

JN Torres, LV Paul, TC Rodwell, TC Victor… - Emerging microbes & …, 2015 - Taylor & Francis
We report the discovery and confirmation of 23 novel mutations with previously
undocumented role in isoniazid (INH) drug resistance, in catalase-peroxidase (katG) gene of …

Systematic review of mutations in pyrazinamidase associated with pyrazinamide resistance in Mycobacterium tuberculosis clinical isolates

SM Ramirez-Busby, F Valafar - Antimicrobial agents and …, 2015 - Am Soc Microbiol
Pyrazinamide (PZA) is an important first-line drug in the treatment of tuberculosis (TB) and of
significant interest to the HIV-infected community due to the prevalence of TB-HIV …

[HTML][HTML] Whole-genome and targeted sequencing of drug-resistant Mycobacterium tuberculosis on the iSeq100 and MiSeq: A performance, ease-of-use, and cost …

RE Colman, A Mace, M Seifert, J Hetzel… - PLoS …, 2019 - journals.plos.org
Background Accurate, comprehensive, and timely detection of drug-resistant tuberculosis
(TB) is essential to inform patient treatment and enable public health surveillance. This is …

Rapid drug susceptibility testing of drug-resistant Mycobacterium tuberculosis isolates directly from clinical samples by use of amplicon sequencing: a proof-of-concept …

RE Colman, J Anderson, D Lemmer… - Journal of clinical …, 2016 - Am Soc Microbiol
Increasingly complex drug-resistant tuberculosis (DR-TB) is a major global health concern
and one of the primary reasons why TB is now the leading infectious cause of death …