[HTML][HTML] High-content CRISPR screening

C Bock, P Datlinger, F Chardon, MA Coelho… - Nature Reviews …, 2022 - nature.com
CRISPR screens are a powerful source of biological discovery, enabling the unbiased
interrogation of gene function in a wide range of applications and species. In pooled …

Synthetic lethality in cancer therapeutics: the next generation

J Setton, M Zinda, N Riaz, D Durocher, M Zimmermann… - Cancer discovery, 2021 - AACR
Synthetic lethality (SL) provides a conceptual framework for tackling targets that are not
classically “druggable,” including loss-of-function mutations in tumor suppressor genes …

Tuning plant phenotypes by precise, graded downregulation of gene expression

C Xue, F Qiu, Y Wang, B Li, KT Zhao, K Chen… - Nature …, 2023 - nature.com
The ability to control gene expression and generate quantitative phenotypic changes is
essential for breeding new and desired traits into crops. Here we report an efficient, facile …

Edible mycelium bioengineered for enhanced nutritional value and sensory appeal using a modular synthetic biology toolkit

V Maini Rekdal, CRB van der Luijt, Y Chen… - Nature …, 2024 - nature.com
Filamentous fungi are critical in the transition to a more sustainable food system. While
genetic modification of these organisms has promise for enhancing the nutritional value …

Sorting for secreted molecule production using a biosensor-in-microdroplet approach

EK Bowman, JM Wagner, SF Yuan… - Proceedings of the …, 2021 - National Acad Sciences
Sorting large libraries of cells for improved small molecule secretion is throughput limited.
Here, we combine producer/secretor cell libraries with whole-cell biosensors using a …

[HTML][HTML] Optimized genome-wide CRISPR screening enables rapid engineering of growth-based phenotypes in Yarrowia lipolytica

NR Robertson, V Trivedi, B Lupish, A Ramesh… - Metabolic …, 2024 - Elsevier
CRISPR-Cas9 functional genomic screens uncover gene targets linked to various
phenotypes for metabolic engineering with remarkable efficiency. However, these genome …

Applications of CRISPR in a microbial cell factory: from genome reconstruction to metabolic network reprogramming

Y Wu, Y Liu, X Lv, J Li, G Du, L Liu - ACS Synthetic Biology, 2020 - ACS Publications
The well-designed microbial cell factory finds wide applications in chemical, pharmaceutical,
and food industries due to its sustainable and environmentally friendly features. Recently …

A genome-scale CRISPR interference guide library enables comprehensive phenotypic profiling in yeast

NJ McGlincy, ZA Meacham, KK Reynaud, R Muller… - BMC genomics, 2021 - Springer
Background CRISPR/Cas9-mediated transcriptional interference (CRISPRi) enables
programmable gene knock-down, yielding loss-of-function phenotypes for nearly any gene …

A simplified strategy for titrating gene expression reveals new relationships between genotype, environment, and bacterial growth

AD Mathis, RM Otto, KA Reynolds - Nucleic acids research, 2021 - academic.oup.com
A lack of high-throughput techniques for making titrated, gene-specific changes in
expression limits our understanding of the relationship between gene expression and cell …

Genome-wide screen for enhanced noncanonical amino acid incorporation in yeast

MT Zackin, JT Stieglitz, JA Van Deventer - ACS synthetic biology, 2022 - ACS Publications
Numerous applications of noncanonical amino acids (ncAAs) in basic biology and
therapeutic development require efficient protein biosynthesis using an expanded genetic …