mRNA nuclear export: how mRNA identity features distinguish functional RNAs from junk transcripts

AF Palazzo, Y Qiu, YM Kang - RNA biology, 2024 - Taylor & Francis
The division of the cellular space into nucleoplasm and cytoplasm promotes quality control
mechanisms that prevent misprocessed mRNAs and junk RNAs from gaining access to the …

SKI complex: A multifaceted cytoplasmic RNA exosome cofactor in mRNA metabolism with links to disease, developmental processes, and antiviral responses

R Tomecki, K Drazkowska… - Wiley Interdisciplinary …, 2023 - Wiley Online Library
RNA stability and quality control are integral parts of gene expression regulation. A key
factor shaping eukaryotic transcriptomes, mainly via 3′–5′ exoribonucleolytic trimming or …

Kinase domain autophosphorylation rewires the activity and substrate specificity of CK1 enzymes

SN Cullati, A Chaikuad, JS Chen, J Gebel, L Tesmer… - Molecular cell, 2022 - cell.com
CK1s are acidophilic serine/threonine kinases with multiple critical cellular functions; their
misregulation contributes to cancer, neurodegenerative diseases, and sleep phase …

Sporulation: A response to starvation in the fission yeast Schizosaccharomyces pombe

H Ohtsuka, K Imada, T Shimasaki, H Aiba - MicrobiologyOpen, 2022 - Wiley Online Library
The fission yeast Schizosaccharomyces pombe employs two main strategies to adapt to the
environment and survive when starved for nutrients. The strategies employ sporulation via …

A scaffold lncRNA shapes the mitosis to meiosis switch

V Andric, A Nevers, D Hazra, S Auxilien… - Nature …, 2021 - nature.com
Long non-coding RNAs (lncRNAs) contribute to the regulation of gene expression in
response to intra-or extracellular signals but the underlying molecular mechanisms remain …

Structural analysis of Red1 as a conserved scaffold of the RNA-targeting MTREC/PAXT complex

AE Foucher, L Touat-Todeschini… - Nature …, 2022 - nature.com
To eliminate specific or aberrant transcripts, eukaryotes use nuclear RNA-targeting
complexes that deliver them to the exosome for degradation. S. pombe MTREC, and its …

An overview on identification and regulatory mechanisms of long non-coding RNAs in fungi

J Li, X Liu, Z Yin, Z Hu, KQ Zhang - Frontiers in Microbiology, 2021 - frontiersin.org
For decades, more and more long non-coding RNAs (lncRNAs) have been confirmed to play
important functions in key biological processes of different organisms. At present, most …

DEAD-box ATPase Dbp2 is the key enzyme in an mRNP assembly checkpoint at the 3'-end of genes and involved in the recycling of cleavage factors

E Aydin, S Schreiner, J Böhme, B Keil, J Weber… - Nature …, 2024 - nature.com
Abstract mRNA biogenesis in the eukaryotic nucleus is a highly complex process. The
numerous RNA processing steps are tightly coordinated to ensure that only fully processed …

The inner nuclear membrane protein Lem2 coordinates RNA degradation at the nuclear periphery

L Martín Caballero, M Capella, RR Barrales… - Nature Structural & …, 2022 - nature.com
Transcriptionally silent chromatin often localizes to the nuclear periphery. However, whether
the nuclear envelope (NE) is a site for post-transcriptional gene repression is not well …

[HTML][HTML] RNA quality control factors nucleate Clr4/SUV39H and trigger constitutive heterochromatin assembly

JS Khanduja, RI Joh, MM Perez, JA Paulo, CM Palmieri… - Cell, 2024 - cell.com
In eukaryotes, the Suv39 family of proteins tri-methylate lysine 9 of histone H3 (H3K9me) to
form constitutive heterochromatin. However, how Suv39 proteins are nucleated at …