In vivo DNA assembly using common laboratory bacteria: A re-emerging tool to simplify molecular cloning

JF Watson, J García-Nafría - Journal of Biological Chemistry, 2019 - ASBMB
Molecular cloning is a cornerstone of biomedical, biotechnological, and synthetic biology
research. As such, improved cloning methodologies can significantly advance the speed …

Evolution of the Pseudomonas aeruginosa quorum-sensing hierarchy

M Kostylev, DY Kim, NE Smalley… - Proceedings of the …, 2019 - National Acad Sciences
The bacterial pathogen Pseudomonas aeruginosa activates expression of many virulence
genes in a cell density-dependent manner by using an intricate quorum-sensing (QS) …

T5 exonuclease-dependent assembly offers a low-cost method for efficient cloning and site-directed mutagenesis

Y Xia, K Li, J Li, T Wang, L Gu, L Xun - Nucleic acids research, 2019 - academic.oup.com
The assembly of DNA fragments with homologous arms is becoming popular in routine
cloning. For an in vitro assembly reaction, a DNA polymerase is often used either alone for …

Genetic requirements for cell division in a genomically minimal cell

JF Pelletier, L Sun, KS Wise, N Assad-Garcia, BJ Karas… - Cell, 2021 - cell.com
Genomically minimal cells, such as JCVI-syn3. 0, offer a platform to clarify genes underlying
core physiological processes. Although this minimal cell includes genes essential for …

IVA cloning: A single-tube universal cloning system exploiting bacterial In Vivo Assembly

J García-Nafría, JF Watson, IH Greger - Scientific reports, 2016 - nature.com
In vivo homologous recombination holds the potential for optimal molecular cloning,
however, current strategies require specialised bacterial strains or laborious protocols. Here …

Crossing enhanced and high fidelity SpCas9 nucleases to optimize specificity and cleavage

PI Kulcsár, A Tálas, K Huszár, Z Ligeti, E Tóth… - Genome biology, 2017 - Springer
Background The propensity for off-target activity of Streptococcus pyogenes Cas9 (SpCas9)
has been considerably decreased by rationally engineered variants with increased fidelity …

Quorum sensing signal selectivity and the potential for interspecies cross talk

S Wellington, EP Greenberg - MBio, 2019 - Am Soc Microbiol
Many species of proteobacteria communicate with kin and coordinate group behaviors
through a form of cell-cell signaling called acyl-homoserine lactone (AHL) quorum sensing …

RhlR-regulated acyl-homoserine lactone quorum sensing in a cystic fibrosis isolate of Pseudomonas aeruginosa

RL Cruz, KL Asfahl, S Van den Bossche, T Coenye… - MBio, 2020 - Am Soc Microbiol
The opportunistic pathogen Pseudomonas aeruginosa is a leading cause of airway infection
in cystic fibrosis (CF) patients. P. aeruginosa employs several hierarchically arranged and …

Manipulation of the microalgal chloroplast by genetic engineering for biotechnological utilization as a green biofactory

YM Kwon, KW Kim, TY Choi, SY Kim… - World Journal of …, 2018 - Springer
The chloroplast is an essential organelle in microalgae for conducting photosynthesis, thus
enabling the photoautotrophic growth of microalgae. In addition to photosynthesis, the …

The Botrytis cinerea Crh1 transglycosylase is a cytoplasmic effector triggering plant cell death and defense response

K Bi, L Scalschi, N Jaiswal, T Mengiste, R Fried… - Nature …, 2021 - nature.com
Crh proteins catalyze crosslinking of chitin and glucan polymers in fungal cell walls. Here,
we show that the BcCrh1 protein from the phytopathogenic fungus Botrytis cinerea acts as a …