Metagenomic approaches for understanding new concepts in microbial science

LF Alves, CA Westmann, GL Lovate… - … journal of genomics, 2018 - Wiley Online Library
Over the past thirty years, since the dawn of metagenomic studies, a completely new (micro)
universe was revealed, with the potential to have profound impacts on many aspects of the …

The good, the bad and the tasty: the many roles of mushrooms

KMJ de Mattos-Shipley, KL Ford, F Alberti… - Studies in …, 2016 - ingentaconnect.com
Fungi are often inconspicuous in nature and this means it is all too easy to overlook their
importance. Often referred to as the “Forgotten Kingdom”, fungi are key components of life …

Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii

D Floudas, BW Held, R Riley, LG Nagy… - Fungal Genetics and …, 2015 - Elsevier
Wood decay mechanisms in Agaricomycotina have been traditionally separated in two
categories termed white and brown rot. Recently the accuracy of such a dichotomy has been …

Symbiont-mediated digestion of plant biomass in fungus-farming insects

H Li, SE Young, M Poulsen… - Annual Review of …, 2021 - annualreviews.org
Feeding on living or dead plant material is widespread in insects. Seminal work on termites
and aphids has provided profound insights into the critical nutritional role that microbes play …

Welcome to the Atta world: A framework for understanding the effects of leaf‐cutter ants on ecosystem functions

AC Swanson, L Schwendenmann, MF Allen… - Functional …, 2019 - Wiley Online Library
Leaf‐cutter ants are a prominent feature in Neotropical ecosystems, but a comprehensive
assessment of their effects on ecosystem functions is lacking. We reviewed the literature and …

Reciprocal genomic evolution in the ant–fungus agricultural symbiosis

S Nygaard, H Hu, C Li, M Schiøtt, Z Chen… - Nature …, 2016 - nature.com
The attine ant–fungus agricultural symbiosis evolved over tens of millions of years,
producing complex societies with industrial-scale farming analogous to that of humans. Here …

Enzymatic systems involved in decomposition reflects the ecology and taxonomy of saprotrophic fungi

I Eichlerová, L Homolka, L Žifčáková, L Lisá… - Fungal Ecology, 2015 - Elsevier
One hundred and eleven strains of Basidiomycota, 39 strains of Ascomycota and 2 strains of
Mucoromycotina belonging to wood decomposers that cause white-rot (WR) or brown-rot …

Mapping microhabitats of lignocellulose decomposition by a microbial consortium

M Veličković, R Wu, Y Gao, MW Thairu… - Nature Chemical …, 2024 - nature.com
The leaf-cutter ant fungal garden ecosystem is a naturally evolved model system for efficient
plant biomass degradation. Degradation processes mediated by the symbiotic fungus …

OcculterCut: a comprehensive survey of AT-rich regions in fungal genomes

AC Testa, RP Oliver, JK Hane - Genome biology and evolution, 2016 - academic.oup.com
We present a novel method to measure the local GC-content bias in genomes and a survey
of published fungal species. The method, enacted as “OcculterCut”(https://sourceforge …

Glyoxal oxidases: their nature and properties

M Daou, CB Faulds - World journal of Microbiology and Biotechnology, 2017 - Springer
H 2 O 2 has been found to be required for the activity of the main microbial enzymes
responsible for lignin oxidative cleavage, peroxidases. Along with other small radicals, it is …