Computational methods of studying the binding of toxins from venomous animals to biological ion channels: theory and applications

D Gordon, R Chen, SH Chung - Physiological Reviews, 2013 - journals.physiology.org
The discovery of new drugs that selectively block or modulate ion channels has great
potential to provide new treatments for a host of conditions. One promising avenue revolves …

Computational approaches for designing potent and selective analogs of peptide toxins as novel therapeutics

S Kuyucak, RS Norton - Future medicinal chemistry, 2014 - Taylor & Francis
Peptide toxins provide valuable therapeutic leads for many diseases. As they bind to their
targets with high affinity, potency is usually ensured. However, toxins also bind to off-target …

Olfactory bulb‐targeted quantum dot (QD) bioconjugate and Kv1. 3 blocking peptide improve metabolic health in obese male mice

AB Schwartz, A Kapur, Z Huang… - Journal of …, 2021 - Wiley Online Library
The olfactory system is a driver of feeding behavior, whereby olfactory acuity is modulated
by the metabolic state of the individual. The excitability of the major output neurons of the …

Structure, Function, and Chemical Synthesis of Vaejovis mexicanus Peptide 24: A Novel Potent Blocker of Kv1.3 Potassium Channels of Human T Lymphocytes

GB Gurrola, RA Hernández-López… - Biochemistry, 2012 - ACS Publications
Animal venoms are rich sources of ligands for studying ion channels and other
pharmacological targets. Proteomic analyses of the soluble venom from the Mexican …

Affinity and selectivity of ShK toxin for the Kv1 potassium channels from free energy simulations

MH Rashid, S Kuyucak - The Journal of Physical Chemistry B, 2012 - ACS Publications
The voltage-gated potassium channel Kv1. 3 is an attractive target for treatment of
autoimmune diseases. ShK toxin from sea anemone is one of the most potent blockers of …

Electrophysiological Characterization of Ts6 and Ts7, K+ Channel Toxins Isolated through an Improved Tityus serrulatus Venom Purification Procedure

FA Cerni, MB Pucca, S Peigneur, CM Cremonez… - Toxins, 2014 - mdpi.com
In Brazil, Tityus serrulatus (Ts) is the species responsible for most of the scorpion related
accidents. Among the Ts toxins, the neurotoxins with action on potassium channels (α-KTx) …

Free energy simulations of binding of HsTx1 toxin to Kv1 potassium channels: the basis of Kv1. 3/Kv1. 1 selectivity

MH Rashid, S Kuyucak - The Journal of Physical Chemistry B, 2014 - ACS Publications
The voltage-gated potassium channel Kv1. 3 is an established target for treatment of
autoimmune diseases. Hence, there are intense efforts to develop immunosuppressant …

Computational studies of venom peptides targeting potassium channels

R Chen, SH Chung - Toxins, 2015 - mdpi.com
Small peptides isolated from the venom of animals are potential scaffolds for ion channel
drug discovery. This review article mainly focuses on the computational studies that have …

Computational studies of marine toxins targeting ion channels

MH Rashid, S Mahdavi, S Kuyucak - Marine Drugs, 2013 - mdpi.com
Toxins from marine animals offer novel drug leads for treatment of diseases involving ion
channels. Computational methods could be very helpful in this endeavour in several ways …

Trans-toxin ion-sensitivity of charybdotoxin-blocked potassium-channels reveals unbinding transitional states

H Moldenhauer, I Díaz-Franulic, H Poblete, D Naranjo - Elife, 2019 - elifesciences.org
In silico and in vitro studies have made progress in understanding protein–protein complex
formation; however, the molecular mechanisms for their dissociation are unclear. Protein …