Long-read human genome sequencing and its applications

GA Logsdon, MR Vollger, EE Eichler - Nature Reviews Genetics, 2020 - nature.com
Over the past decade, long-read, single-molecule DNA sequencing technologies have
emerged as powerful players in genomics. With the ability to generate reads tens to …

30 years of repeat expansion disorders: What have we learned and what are the remaining challenges?

C Depienne, JL Mandel - The American Journal of Human Genetics, 2021 - cell.com
Tandem repeats represent one of the most abundant class of variations in human genomes,
which are polymorphic by nature and become highly unstable in a length-dependent …

An update on the neurological short tandem repeat expansion disorders and the emergence of long-read sequencing diagnostics

SR Chintalaphani, SS Pineda, IW Deveson… - Acta Neuropathologica …, 2021 - Springer
Background Short tandem repeat (STR) expansion disorders are an important cause of
human neurological disease. They have an established role in more than 40 different …

The GGC repeat expansion in NOTCH2NLC is associated with oculopharyngodistal myopathy type 3

J Yu, J Deng, X Guo, J Shan, X Luan, L Cao, J Zhao… - Brain, 2021 - academic.oup.com
Oculopharyngodistal myopathy (OPDM) is an adult-onset neuromuscular disease
characterized by progressive ocular, facial, pharyngeal and distal limb muscle involvement …

CGG expansion in NOTCH2NLC is associated with oculopharyngodistal myopathy with neurological manifestations

M Ogasawara, A Iida, T Kumutpongpanich… - Acta Neuropathologica …, 2020 - Springer
Oculopharyngodistal myopathy (OPDM) is a rare hereditary muscle disease characterized
by progressive distal limb weakness, ptosis, ophthalmoplegia, bulbar muscle weakness and …

Advancing genomic technologies and clinical awareness accelerates discovery of disease-associated tandem repeat sequences

T Gall-Duncan, N Sato, RKC Yuen… - Genome …, 2022 - genome.cshlp.org
Expansions of gene-specific DNA tandem repeats (TRs), first described in 1991 as a
disease-causing mutation in humans, are now known to cause> 60 phenotypes, not just …

Clinical features of NOTCH2NLC-related neuronal intranuclear inclusion disease

Y Tian, L Zhou, J Gao, B Jiao, S Zhang… - Journal of Neurology …, 2022 - jnnp.bmj.com
Background Abnormal expanded GGC repeats within the NOTCH2HLC gene has been
confirmed as the genetic mechanism for most Asian patients with neuronal intranuclear …

Neuronal intranuclear inclusion disease in patients with adult-onset non-vascular leukoencephalopathy

YH Liu, YT Chou, FP Chang, WJ Lee, YC Guo… - Brain, 2022 - academic.oup.com
Neuronal intranuclear inclusion disease (NIID), caused by an expansion of GGC repeats in
the 5′-untranslated region of NOTCH2NLC, is an important but underdiagnosed cause of …

Identification of GGC repeat expansion in the NOTCH2NLC gene in amyotrophic lateral sclerosis

Y Yuan, Z Liu, X Hou, W Li, J Ni, L Huang, Y Hu, P Liu… - Neurology, 2020 - AAN Enterprises
Objective To determine whether the GGC repeats in the NOTCH2NLC gene contribute to
amyotrophic lateral sclerosis (ALS). Methods In this study, 545 patients with ALS and 1,305 …

CGG repeat expansion in NOTCH2NLC causes mitochondrial dysfunction and progressive neurodegeneration in Drosophila model

J Yu, T Liufu, Y Zheng, J Xu, L Meng… - Proceedings of the …, 2022 - National Acad Sciences
Neuronal intranuclear inclusion disease (NIID) is a neuromuscular/neurodegenerative
disease caused by the expansion of CGG repeats in the 5′ untranslated region (UTR) of …