Deep learning and its applications in biomedicine

C Cao, F Liu, H Tan, D Song, W Shu… - Genomics …, 2018 - academic.oup.com
Advances in biological and medical technologies have been providing us explosive
volumes of biological and physiological data, such as medical images …

Deep learning in bioinformatics

S Min, B Lee, S Yoon - Briefings in bioinformatics, 2017 - academic.oup.com
In the era of big data, transformation of biomedical big data into valuable knowledge has
been one of the most important challenges in bioinformatics. Deep learning has advanced …

Deep learning: methods and applications

L Deng, D Yu - Foundations and trends® in signal processing, 2014 - nowpublishers.com
This monograph provides an overview of general deep learning methodology and its
applications to a variety of signal and information processing tasks. The application areas …

A tutorial survey of architectures, algorithms, and applications for deep learning

L Deng - APSIPA transactions on Signal and Information …, 2014 - cambridge.org
In this invited paper, my overview material on the same topic as presented in the plenary
overview session of APSIPA-2011 and the tutorial material presented in the same …

A deep learning framework for modeling structural features of RNA-binding protein targets

S Zhang, J Zhou, H Hu, H Gong, L Chen… - Nucleic acids …, 2016 - academic.oup.com
RNA-binding proteins (RBPs) play important roles in the post-transcriptional control of
RNAs. Identifying RBP binding sites and characterizing RBP binding preferences are key …

Boosting compound-protein interaction prediction by deep learning

K Tian, M Shao, Y Wang, J Guan, S Zhou - Methods, 2016 - Elsevier
The identification of interactions between compounds and proteins plays an important role in
network pharmacology and drug discovery. However, experimentally identifying compound …

A comprehensive overview of lncRNA annotation resources

J Xu, J Bai, X Zhang, Y Lv, Y Gong, L Liu… - Briefings in …, 2017 - academic.oup.com
Long noncoding RNAs (lncRNAs) are emerging as a class of important regulators
participating in various biological functions and disease processes. With the widespread …

Improved contact predictions using the recognition of protein like contact patterns

MJ Skwark, D Raimondi, M Michel… - PLoS computational …, 2014 - journals.plos.org
Given sufficient large protein families, and using a global statistical inference approach, it is
possible to obtain sufficient accuracy in protein residue contact predictions to predict the …

[HTML][HTML] Microarray cancer feature selection: Review, challenges and research directions

MA Hambali, TO Oladele, KS Adewole - International Journal of Cognitive …, 2020 - Elsevier
Microarray technology has become an emerging trend in the domain of genetic research in
which many researchers employ to study and investigate the levels of genes' expression in a …

Prediction of human cytochrome P450 inhibition using a multitask deep autoencoder neural network

X Li, Y Xu, L Lai, J Pei - Molecular pharmaceutics, 2018 - ACS Publications
Adverse side effects of drug–drug interactions induced by human cytochrome P450
(CYP450) inhibition is an important consideration in drug discovery. It is highly desirable to …