Assessing the human immune system through blood transcriptomics

D Chaussabel, V Pascual, J Banchereau - BMC biology, 2010 - Springer
Blood is the pipeline of the immune system. Assessing changes in transcript abundance in
blood on a genome-wide scale affords a comprehensive view of the status of the immune …

Voluntary exploratory data submissions to the US FDA and the EMA: experience and impact

FM Goodsaid, S Amur, J Aubrecht… - Nature reviews Drug …, 2010 - nature.com
Heterogeneity in the underlying mechanisms of disease processes and inter-patient
variability in drug responses are major challenges in drug development. To address these …

Kidney transplant rejection and tissue injury by gene profiling of biopsies and peripheral blood lymphocytes

SM Flechner, SM Kurian, SR Head… - American Journal of …, 2004 - Wiley Online Library
A major challenge for kidney transplantation is balancing the need for immunosuppression
to prevent rejection, while minimizing drug‐induced toxicities. We used DNA microarrays …

Proteomic-based detection of urine proteins associated with acute renal allograft rejection

S Schaub, D Rush, J Wilkins, IW Gibson… - Journal of the …, 2004 - journals.lww.com
At present, the diagnosis of renal allograft rejection requires a renal biopsy. Clinical
management of renal transplant patients would be improved by the development of non …

Multiplexed color‐coded probe‐based gene expression assessment for clinical molecular diagnostics in formalin‐fixed paraffin‐embedded human renal allograft …

B Adam, B Afzali, KM Dominy, E Chapman… - Clinical …, 2016 - Wiley Online Library
Histopathologic diagnoses in transplantation can be improved with molecular testing.
Preferably, molecular diagnostics should fit into standard‐of‐care workflows for transplant …

[HTML][HTML] Progressive histological damage in renal allografts is associated with expression of innate and adaptive immunity genes

M Naesens, P Khatri, L Li, TK Sigdel, MJ Vitalone… - Kidney international, 2011 - Elsevier
The degree of progressive chronic histological damage is associated with long-term renal
allograft survival. In order to identify promising molecular targets for timely intervention, we …

[HTML][HTML] The molecular phenotype of 6-week protocol biopsies from human renal allografts: reflections of prior injury but not future course

M Mengel, J Chang, D Kayser, W Gwinner… - American Journal of …, 2011 - Elsevier
We assessed the molecular phenotype of 107 6-week protocol biopsies from human renal
allografts, using Affymetrix microarrays. Transcript changes were summarized as …

Urinary expression of kidney injury markers in renal transplant recipients

CC Szeto, BCH Kwan, KB Lai, FMM Lai… - Clinical Journal of the …, 2010 - journals.lww.com
Background and objectives: The outcome of renal transplantation after an episode of acute
rejection is difficult to predict, even with an allograft biopsy. We examined whether urinary …

A type I interferon signature characterizes chronic antibody‐mediated rejection in kidney transplantation

F Rascio, P Pontrelli, M Accetturo… - The journal of …, 2015 - Wiley Online Library
Chronic antibody‐mediated rejection (CAMR) represents the main cause of kidney graft
loss. To uncover the molecular mechanisms underlying this condition, we characterized the …

[HTML][HTML] Identification of gene markers for the prediction of allograft rejection or permanent acceptance

B Sawitzki, A Bushell, U Steger, N Jones… - American Journal of …, 2007 - Elsevier
The clinical success of new treatment strategies aiming on inducing permanent graft
acceptance will rely on the ability to determine whether specific unresponsiveness to donor …