Chemistry, structure and function of approved oligonucleotide therapeutics

M Egli, M Manoharan - Nucleic Acids Research, 2023 - academic.oup.com
Eighteen nucleic acid therapeutics have been approved for treatment of various diseases in
the last 25 years. Their modes of action include antisense oligonucleotides (ASOs), splice …

SAR11 bacteria: the most abundant plankton in the oceans

SJ Giovannoni - Annual review of marine science, 2017 - annualreviews.org
SAR11 is a group of small, carbon-oxidizing bacteria that reach a global estimated
population size of 2.4× 1028 cells—approximately 25% of all plankton. They are found …

Phage–host coevolution in natural populations

D Piel, M Bruto, Y Labreuche, F Blanquart… - Nature …, 2022 - nature.com
Coevolution between bacteriophages (phages) and their bacterial hosts occurs through
changes in resistance and counter-resistance mechanisms. To assess phage–host …

BREX is a novel phage resistance system widespread in microbial genomes

T Goldfarb, H Sberro, E Weinstock, O Cohen… - The EMBO …, 2015 - embopress.org
The perpetual arms race between bacteria and phage has resulted in the evolution of
efficient resistance systems that protect bacteria from phage infection. Such systems, which …

Abundant SAR11 viruses in the ocean

Y Zhao, B Temperton, JC Thrash, MS Schwalbach… - Nature, 2013 - nature.com
Several reports proposed that the extraordinary dominance of the SAR11 bacterial clade in
ocean ecosystems could be a consequence of unusual mechanisms of resistance to …

SspABCD–SspE is a phosphorothioation-sensing bacterial defence system with broad anti-phage activities

X Xiong, G Wu, Y Wei, L Liu, Y Zhang, R Su… - Nature …, 2020 - nature.com
Bacteria have evolved diverse mechanisms to fend off predation by bacteriophages. We
previously identified the Dnd system, which uses DndABCDE to insert sulfur into the DNA …

A new toxicity mechanism of N-(1, 3-Dimethylbutyl)-N′-phenyl-p-phenylenediamine quinone: Formation of DNA adducts in mammalian cells and aqueous organisms

J Wu, G Cao, F Zhang, Z Cai - Science of The Total Environment, 2023 - Elsevier
Abstract N-(1, 3-dimethylbutyl)-N′-phenyl-p-phenylenediamine-quinone (6PPDQ), one of
the oxidation products of rubber antioxidant 6PPD, has been identified as a novel toxicant to …

Advances in CRISPR-Cas systems for RNA targeting, tracking and editing

F Wang, L Wang, X Zou, S Duan, Z Li, Z Deng… - Biotechnology …, 2019 - Elsevier
Clustered regularly interspaced short palindromic repeat (CRISPR)/CRISPR-associated
protein (Cas) systems, especially type II (Cas9) systems, have been widely used in …

Adenine methylation in eukaryotes: Apprehending the complex evolutionary history and functional potential of an epigenetic modification

LM Iyer, D Zhang, L Aravind - Bioessays, 2016 - Wiley Online Library
While N6‐methyladenosine (m6A) is a well‐known epigenetic modification in bacterial DNA,
it remained largely unstudied in eukaryotes. Recent studies have brought to fore its potential …

The other face of restriction: modification-dependent enzymes

WAM Loenen, EA Raleigh - Nucleic acids research, 2014 - academic.oup.com
The 1952 observation of host-induced non-hereditary variation in bacteriophages by
Salvador Luria and Mary Human led to the discovery in the 1960s of modifying enzymes that …