Molecular electron microscopy: state of the art and current challenges

H Stahlberg, T Walz - ACS chemical biology, 2008 - ACS Publications
The objective of molecular electron microscopy (EM) is to use electron microscopes to
visualize the structure of biological molecules. This Review provides a brief overview of the …

2dx—user-friendly image processing for 2D crystals

B Gipson, X Zeng, ZY Zhang, H Stahlberg - Journal of structural biology, 2007 - Elsevier
Electron crystallography determines the structure of two-dimensional (2D) membrane
protein crystals and other 2D crystal systems. Cryo-transmission electron microscopy …

Electron cryomicroscopy of membrane proteins: specimen preparation for two-dimensional crystals and single particles

I Schmidt-Krey, JL Rubinstein - Micron, 2011 - Elsevier
Membrane protein structure and function can be studied by two powerful and highly
complementary electron cryomicroscopy (cryo-EM) methods: electron crystallography of two …

Combining X-ray Crystallography and Molecular Modeling toward the Optimization of Pyrazolo[3,4-d]pyrimidines as Potent c-Src Inhibitors Active in Vivo against …

C Tintori, AL Fallacara, M Radi… - Journal of Medicinal …, 2015 - ACS Publications
c-Src is a tyrosine kinase belonging to the Src-family kinases. It is overexpressed and/or
hyperactivated in a variety of cancer cells, thus its inhibition has been predicted to have …

2dx_merge: data management and merging for 2D crystal images

B Gipson, X Zeng, H Stahlberg - Journal of structural biology, 2007 - Elsevier
Electron crystallography of membrane proteins determines the structure of membrane-
reconstituted and two-dimensionally (2D) crystallized membrane proteins by low-dose …

Cryo-electron microscopy of membrane proteins

KN Goldie, P Abeyrathne, F Kebbel, M Chami… - … : Methods and Protocols, 2014 - Springer
Electron crystallography is used to study membrane proteins in the form of planar, two-
dimensional (2D) crystals, or other crystalline arrays such as tubular crystals. This method …

Crystal image analysis using 2D synchrosqueezed transforms

H Yang, J Lu, L Ying - Multiscale Modeling & Simulation, 2015 - SIAM
We propose efficient algorithms based on a band-limited version of 2D synchrosqueezed
transforms to extract mesoscopic and microscopic information from atomic crystal images …

3D reconstruction of two-dimensional crystals

H Stahlberg, N Biyani, A Engel - Archives of biochemistry and biophysics, 2015 - Elsevier
Electron crystallography of two-dimensional (2D) crystals determines the structure of
membrane proteins in the lipid bilayer by imaging with cryo-electron microscopy and image …

[HTML][HTML] 2dx_automator: Implementation of a semiautomatic high-throughput high-resolution cryo-electron crystallography pipeline

S Scherer, J Kowal, M Chami, V Dandey… - Journal of structural …, 2014 - Elsevier
The introduction of direct electron detectors (DED) to cryo-electron microscopy has
tremendously increased the signal-to-noise ratio (SNR) and quality of the recorded images …

3D reconstruction from 2D crystal image and diffraction data

AD Schenk, D Castaño-Díez, B Gipson, M Arheit… - Methods in …, 2010 - Elsevier
Electron crystallography of 2D protein crystals can determine the structure of membrane
embedded proteins at high resolution. Images or electron diffraction patterns are recorded …