Nanopore sequencing of DNA-barcoded probes for highly multiplexed detection of microRNA, proteins and small biomarkers

C Koch, B Reilly-O'Donnell, R Gutierrez… - Nature …, 2023 - nature.com
There is an unmet need to develop low-cost, rapid and highly multiplexed diagnostic
technology platforms for quantitatively detecting blood biomarkers to advance clinical …

Single-molecule amplification-free multiplexed detection of circulating microRNA cancer biomarkers from serum

S Cai, T Pataillot-Meakin, A Shibakawa, R Ren… - Nature …, 2021 - nature.com
MicroRNAs (miRNAs) play essential roles in post-transcriptional gene expression and are
also found freely circulating in bodily fluids such as blood. Dysregulated miRNA signatures …

Rolling circle reverse transcription enables high fidelity nanopore sequencing of small RNA

S Maguire, S Guan - PloS one, 2022 - journals.plos.org
Small RNAs (sRNAs) are an important group of non-coding RNAs that have great potential
as diagnostic and prognostic biomarkers for treatment of a wide variety of diseases. The …

Ready-to-use nanopore platform for label-free small molecule quantification: Ethanolamine as first example

I Quint, J Simantzik, L Kaiser, S Laufer, D Smith… - … , Biology and Medicine, 2024 - Elsevier
In recent decades, nanopores have become a promising diagnostic tool. Protein and solid-
state nanopores are increasingly used for both RNA/DNA sequencing and small molecule …

Recent advances in ultrasensitive miRNA biomarkers detection

K Djebbi, M Bahri, MA Elaguech, R Tian, S Biao… - Advanced sensors for …, 2021 - Springer
Recently, microRNAs gain a great interest in the bio-molecular field due to their fundamental
role in clinical diagnostics. In this chapter, we generally discussed the biogenesis of …

[HTML][HTML] High Sensitivity and Specificity Platform to Validate MicroRNA Biomarkers in Cancer and Human Diseases

A Kanavarioti, MH Rehman, S Qureshi, A Rafiq… - Non-coding RNA, 2024 - mdpi.com
We developed a technology for detecting and quantifying trace nucleic acids using a
bracketing protocol designed to yield a copy number with approximately±20% accuracy …

Detection of disease-associated microRNAs—application for autism spectrum disorders

B Konečná, J Radošinská, P Keményová… - Reviews in the …, 2020 - degruyter.com
Autism spectrum disorders (ASD) diagnostic procedure still lacks a uniform biological
marker. This review gathers the information on microRNAs (miRNAs) specifically as a …

Molecular profiling and detection methods of microRNA in cancer research

NS Ab Mutalib, I Ismail, HL Ser - Progress In Microbes …, 2020 - journals.hh-publisher.com
A large portion of human genome was believed to be “useless” and termed as “junk DNA” in
the past, given that these sequences did not have any protein coding role. However, with …

Ready-to-use nanopore platform for the detection of any DNA/RNA oligo at attomole range using an Osmium tagged complementary probe

ASW Kang, JG Bernasconi, W Jack, A Kanavarioti - Scientific reports, 2020 - nature.com
Nanopores can serve as single molecule sensors. We exploited the MinION, a portable
nanopore device from Oxford Nanopore Technologies, and repurposed it to detect any …

Analytical platform to validate microRNA biomarkers for cancer or disease with practically 100% sensitivity and specificity

A Kanavarioti, MH Rehman, S Qureshi, A Rafiq… - medRxiv, 2024 - medrxiv.org
We developed a technology for detecting and quantifying trace nucleic acids using a
bracketing protocol designed to yield a copy number with approximately±20% accuracy …