Next-generation sequencing for confronting virus pandemics

J Quer, S Colomer-Castell, C Campos, C Andrés… - Viruses, 2022 - mdpi.com
Virus pandemics have happened, are happening and will happen again. In recent decades,
the rate of zoonotic viral spillover into humans has accelerated, mirroring the expansion of …

Indoor air pollution with fine particles and implications for workers' health in dental offices: A brief review

DM Cocârţă, M Prodana, I Demetrescu, PEM Lungu… - Sustainability, 2021 - mdpi.com
(1) Background: Indoor air pollution can affect the well-being and health of humans. Sources
of indoor pollution with particulate matter (PM) are outdoor particles and indoor causes, such …

Direct detection of conserved viral sequences and other nucleic acid motifs with solid-state nanopores

K Sethi, GP Dailey, OK Zahid, EW Taylor, JA Ruzicka… - ACS …, 2021 - ACS Publications
The rapid and reliable recognition of nucleic acid sequences is essential to a broad range of
fields including genotyping, gene expression analysis, and pathogen screening. For viral …

Sample preparation and diagnostic methods for a variety of settings: A comprehensive review

ZE Nichols, CD Geddes - Molecules, 2021 - mdpi.com
Sample preparation is an essential step for nearly every type of biochemical analysis in use
today. Among the most important of these analyses is the diagnosis of diseases, since their …

Viral metagenomics for identification of emerging viruses in transfusion medicine

SN Slavov - Viruses, 2022 - mdpi.com
Viral metagenomics has revolutionized our understanding for identification of unknown or
poorly characterized viruses. For that reason, metagenomic studies gave been largely …

[HTML][HTML] Viral metagenomic sequencing in a cohort of international travellers returning with febrile illness

A Reyes, EC Carbo, JSH thoe Slooten… - Journal of Clinical …, 2021 - Elsevier
Background: Diagnosis of infections in returning international travellers can be challenging
because of the broad spectrum of potential infectious etiologies potentially involved. Viral …

Analysis of HBV genomes integrated into the genomes of human hepatoma PLC/PRF/5 cells by HBV sequence capture-based next-generation sequencing

T Ishii, A Tamura, T Shibata, K Kuroda, T Kanda… - Genes, 2020 - mdpi.com
Hepatitis B virus (HBV) infection is a leading cause of hepatocellular carcinoma (HCC)
worldwide. The integration of HBV genomic DNA into the host genome occurs randomly …

Unlocking the Viral Universe: Metagenomic Analysis of Bat Samples Using Next-Generation Sequencing

GV Roev, NI Borisova, NV Chistyakova, MR Agletdinov… - Microorganisms, 2023 - mdpi.com
Next-generation sequencing technologies have revolutionized the field of virology by
enabling the reading of complete viral genomes, extensive metagenomic studies, and the …

Composition of eukaryotic viruses and bacteriophages in individuals with acute gastroenteritis

E do Socorro Fôro Ramos, G de Oliveira Ribeiro… - Viruses, 2021 - mdpi.com
Metagenomics based on the next-generation sequencing (NGS) technique is a target-
independent assay that enables the simultaneous detection and genomic characterization of …

Virosaurus a reference to explore and capture virus genetic diversity

A Gleizes, F Laubscher, N Guex, C Iseli, T Junier… - Viruses, 2020 - mdpi.com
The huge genetic diversity of circulating viruses is a challenge for diagnostic assays for
emerging or rare viral diseases. High-throughput technology offers a new opportunity to …