[HTML][HTML] Mathematical modeling of regulatory networks of intracellular processes–Aims and selected methods

M Kardynska, D Kogut, M Pacholczyk… - Computational and …, 2023 - Elsevier
Regulatory networks structure and signaling pathways dynamics are uncovered in time-and
resource consuming experimental work. However, it is increasingly supported by modeling …

Mathematical Modeling Support for Lung Cancer Therapy—A Short Review

J Smieja - International Journal of Molecular Sciences, 2023 - mdpi.com
The paper presents a review of models that can be used to describe dynamics of lung
cancer growth and its response to treatment at both cell population and intracellular …

Mycobacterium tuberculosis resisters despite HIV exhibit activated T cells and macrophages in their pulmonary alveoli

M Dallmann-Sauer, VM Fava, ST Malherbe… - The Journal of Clinical …, 2025 - jci.org
Natural resistance to Mycobacterium tuberculosis (Mtb) infection in some people with HIV
(PWH) is unexplained. We performed single cell RNA-sequencing of bronchoalveolar …

[HTML][HTML] The multifunctional role of IFN-γ in Galleria mellonella (Lepidoptera) immunocompetent cells

A Kaczmarek, AK Wrońska, J Sobich, MI Boguś - Cytokine, 2025 - Elsevier
Cytokines are highly conserved between mammals and insects. The present study
examines the multiple effects of interferon-gamma (IFN-γ) application on the immunological …

IFNγ-mediated IL-33 production is dependent on the aryl hydrocarbon receptor in human bronchial epithelial cells

C Marshall, M Hemshekhar, D Lloyd, N Mookherjee - Cytokine, 2023 - Elsevier
IL-33 is an alarmin produced by stromal cells and is known to promote airway inflammation.
IL-33 is a critical mediator of steroid-unresponsiveness in severe asthma. We have …

An engineering perspective on transcription, translation and their regulation

J Smieja - Postępy Biochemii, 2024 - postepybiochemii.ptbioch.edu.pl
Information coded in DNA is replicated, modified and transmitted from the origins of protein-
based life. Analogies of these processes to information processing, transmission and …

Exploring the cGAS-STING axis and DNA damage after infection with respiratory syncytial virus

FS Frossdal - 2024 - ntnuopen.ntnu.no
Cyclic GMP-AMP synthase (cGAS) is primarily recognized as a cytosolic DNA sensor,
activating innate immune responses through the stimulator of interferon genes (STING) …

Variability of the innate immune response is globally constrained by transcriptional bursting

N Alachkar, D Norton, Z Wolkensdorfer… - Frontiers in Molecular …, 2023 - frontiersin.org
Transcription of almost all mammalian genes occurs in stochastic bursts, however the
fundamental control mechanisms that allow appropriate single-cell responses remain …