Abstract The Integrated Microbial Genomes & Microbiomes system (IMG/M: https://img. jgi.
doe. gov/m/) at the Department of Energy (DOE) Joint Genome Institute (JGI) continues to …

Objective In recent years, we have increasingly observed issues concerning quality of online
information due to misinformation and disinformation. Aside from social media, there is …

Most tools developed to visualize hierarchically clustered heatmaps generate static images.
Clustergrammer is a web-based visualization tool with interactive features such as: zooming …

Infections and inflammation can lead to cachexia and wasting of skeletal muscle and fat
tissue by as yet poorly understood mechanisms. We observed that gut colonization of mice …

Background Transcriptomics, metabolomics, metagenomics, and other various next-
generation sequencing (-omics) fields are known for their production of large datasets …

Simple Summary Cattle are fed a high-concentrate diet to improve their productivity;
however, it alters the rumen ecosystem due to high structural carbohydrates level, resulting …

Several recent studies have portrayed DNA methylation as a new player in the recruitment of
transcription factors (TF) within chromatin, highlighting a need to connect TF binding sites …

Motivation: A key component of the analysis of microbiome datasets is the identification of
OTUs shared between multiple experimental conditions, commonly referred to as the core …

Secondary metabolites produced by microbes have diverse biological functions, which
makes them a great potential source of biotechnologically relevant compounds with …

Background Cassava is an important food crop in tropical and sub-tropical regions
worldwide. In Africa, cassava production is widely affected by cassava mosaic disease …