Genetic regulation of biological nitrogen fixation

R Dixon, D Kahn - Nature Reviews Microbiology, 2004 - nature.com
Some bacteria have the remarkable capacity to fix atmospheric nitrogen to ammonia under
ambient conditions, a reaction only mimicked on an industrial scale by a chemical process …

Structure and signaling mechanism of Per-ARNT-Sim domains

A Möglich, RA Ayers, K Moffat - Structure, 2009 - cell.com
Per-ARNT-Sim (PAS) domains serve as versatile sensor and interaction modules in signal
transduction proteins. PAS sensors detect chemical and physical stimuli and regulate the …

Ligand-binding PAS domains in a genomic, cellular, and structural context

JT Henry, S Crosson - Annual review of microbiology, 2011 - annualreviews.org
Per-Arnt-Sim (PAS) domains occur in proteins from all kingdoms of life. In the bacterial
kingdom, PAS domains are commonly positioned at the amino terminus of signaling proteins …

Circadian oscillators: around the transcription–translation feedback loop and on to output

JM Hurley, JJ Loros, JC Dunlap - Trends in biochemical sciences, 2016 - cell.com
From cyanobacteria to mammals, organisms have evolved timing mechanisms to adapt to
environmental changes in order to optimize survival and improve fitness. To anticipate these …

Mammalian Per-Arnt-Sim proteins in environmental adaptation

BE McIntosh, JB Hogenesch… - Annual review of …, 2010 - annualreviews.org
The Per-Arnt-Sim (PAS) domain is conserved across the kingdoms of life and found in an
ever-growing list of proteins. This domain can bind to and sense endogenous or xenobiotic …

Reporter proteins for in vivo fluorescence without oxygen

T Drepper, T Eggert, F Circolone, A Heck… - Nature …, 2007 - nature.com
Fluorescent reporter proteins such as green fluorescent protein are valuable noninvasive
molecular tools for in vivo real-time imaging of living specimens. However, their use is …

The biochemistry of methane oxidation

AS Hakemian, AC Rosenzweig - Annu. Rev. Biochem., 2007 - annualreviews.org
Methanotrophic bacteria oxidize methane to methanol in the first step of their metabolic
pathway. Two forms of methane monooxygenase (MMO) enzymes catalyze this reaction …

Plant Raf-like kinase integrates abscisic acid and hyperosmotic stress signaling upstream of SNF1-related protein kinase2

M Saruhashi, T Kumar Ghosh, K Arai… - Proceedings of the …, 2015 - National Acad Sciences
Plant response to drought and hyperosmosis is mediated by the phytohormone abscisic acid
(ABA), a sesquiterpene compound widely distributed in various embryophyte groups …

Structural basis for light-dependent signaling in the dimeric LOV domain of the photosensor YtvA

A Möglich, K Moffat - Journal of molecular biology, 2007 - Elsevier
The photosensor YtvA binds flavin mononucleotide and regulates the general stress
reaction in Bacillus subtilis in response to blue light illumination. It belongs to the family of …

Flavin‐based blue‐light photosensors: a photobiophysics update

A Losi - Photochemistry and photobiology, 2007 - Wiley Online Library
This review deals with the biophysical aspects of flavin‐based photosensors, comprising
cryptochromes, LOV (Light, Oxygen and Voltage) and BLUF (Blue Light sensing Using FAD) …