Frequent transmission of the Mycobacterium tuberculosis Beijing lineage and positive selection for the EsxW Beijing variant in Vietnam

KE Holt, P McAdam, PVK Thai, NTT Thuong, DTM Ha… - Nature …, 2018 - nature.com
To examine the transmission dynamics of Mycobacterium tuberculosis (Mtb) isolated from
tuberculosis patients in Ho Chi Minh City, Vietnam, we sequenced the whole genomes of …

Effectiveness and safety of levofloxacin containing regimen in the treatment of Isoniazid mono-resistant pulmonary tuberculosis: A systematic review

LR Inbaraj, HD Shewade, J Daniel… - Frontiers in …, 2023 - frontiersin.org
Background We aimed to determine the effectiveness and safety of the Levofloxacin-
containing regimen that the World Health Organization is currently recommending for the …

Empirical ways to identify novel Bedaquiline resistance mutations in AtpE

M Karmakar, CHM Rodrigues, KE Holt, SJ Dunstan… - PloS one, 2019 - journals.plos.org
Clinical resistance against Bedaquiline, the first new anti-tuberculosis compound with a
novel mechanism of action in over 40 years, has already been detected in Mycobacterium …

Identification of bacterial determinants of tuberculosis infection and treatment outcomes: a phenogenomic analysis of clinical strains

S Stanley, CN Spaulding, Q Liu, MR Chase… - The Lancet …, 2024 - thelancet.com
Background Bacterial diversity could contribute to the diversity of tuberculosis infection and
treatment outcomes observed clinically, but the biological basis of this association is poorly …

Endogenous relapse and exogenous reinfection in recurrent pulmonary tuberculosis: A retrospective study revealed by whole genome sequencing

W He, Y Tan, Z Song, B Liu, Y Wang, P He… - Frontiers in …, 2023 - frontiersin.org
Background Tuberculosis may reoccur due to reinfection or relapse after initially successful
treatment. Distinguishing the cause of TB recurrence is crucial to guide TB control and …

MUC5AC Genetic Variation Is Associated With Tuberculous Meningitis Cerebral Spinal Fluid Cytokine Responses and Mortality

MC Sabo, NTT Thuong, X Chang… - The Journal of …, 2023 - academic.oup.com
Background The purpose of this study was to assess if single nucleotide polymorphisms
(SNPs) in lung mucins MUC5B and MUC5AC are associated with Mycobacterium …

Sources of multidrug resistance in patients with previous isoniazid-resistant tuberculosis identified using whole genome sequencing: A longitudinal cohort study

V Srinivasan, VTN Ha, DN Vinh… - Clinical Infectious …, 2020 - academic.oup.com
Background Meta-analysis of patients with isoniazid-resistant tuberculosis (TB) given
standard first-line anti-TB treatment indicated an increased risk of multidrug-resistant TB …

Analysis of serial multidrug-resistant tuberculosis strains causing treatment failure and within-host evolution by whole-genome sequencing

X Chen, G He, S Lin, S Wang, F Sun, J Chen, W Zhang - Msphere, 2020 - Am Soc Microbiol
The cure rate of multidrug-resistant tuberculosis (MDR-TB) is relatively low in China. The
reasons for the treatment failure and within-host evolution during treatment have not been …

Fluoroquinolones and isoniazid-resistant tuberculosis: implications for the 2018 WHO guidance

HR Stagg, GH Bothamley… - European …, 2019 - publications.ersnet.org
Introduction 2018 World Health Organization (WHO) guidelines for the treatment of isoniazid
(H)-resistant (Hr) tuberculosis recommend a four-drug regimen: rifampicin (R), ethambutol …

Disruption of aldehyde dehydrogenase 2 protects against bacterial infection

SB Berry, S Espich, NTT Thuong, X Chang, R Dorajoo… - bioRxiv, 2023 - biorxiv.org
Abstract The ALDH2* 2 (rs671) allele is one of the most common genetic mutations in
humans, yet the positive evolutionary selective pressure to maintain this mutation is …