Artificial intelligence in cancer target identification and drug discovery

Y You, X Lai, Y Pan, H Zheng, J Vera, S Liu… - … and Targeted Therapy, 2022 - nature.com
Artificial intelligence is an advanced method to identify novel anticancer targets and discover
novel drugs from biology networks because the networks can effectively preserve and …

Systems biology and machine learning in plant–pathogen interactions

B Mishra, N Kumar, MS Mukhtar - Molecular Plant-Microbe …, 2019 - Am Phytopath Society
Systems biology is an inclusive approach to study the static and dynamic emergent
properties on a global scale by integrating multiomics datasets to establish qualitative and …

[HTML][HTML] Disease networks and their contribution to disease understanding: A review of their evolution, techniques and data sources

EPG Del Valle, GL García, LP Santamaría… - Journal of biomedical …, 2019 - Elsevier
Over a decade ago, a new discipline called network medicine emerged as an approach to
understand human diseases from a network theory point-of-view. Disease networks proved …

Determining the balance between drug efficacy and safety by the network and biological system profile of its therapeutic target

XX Li, J Yin, J Tang, Y Li, Q Yang, Z Xiao… - Frontiers in …, 2018 - frontiersin.org
One of the most challenging puzzles in drug discovery is the identification and
characterization of candidate drug of well-balanced profile between efficacy and safety. So …

[HTML][HTML] Network biology: Recent advances and challenges

P Wang - Gene & Protein in Disease, 2022 - accscience.com
Biological networks have garnered widespread attention. The development of biological
networks has spawned the birth of a new interdisciplinary field–network biology. Network …

Drug repositioning for non-small cell lung cancer by using machine learning algorithms and topological graph theory

CH Huang, PMH Chang, CW Hsu, CYF Huang… - BMC …, 2016 - Springer
Background Non-small cell lung cancer (NSCLC) is one of the leading causes of death
globally, and research into NSCLC has been accumulating steadily over several years. Drug …

Systematic interrogation of diverse Omic data reveals interpretable, robust, and generalizable transcriptomic features of clinically successful therapeutic targets

AD Rouillard, MR Hurle, P Agarwal - PLoS Computational Biology, 2018 - journals.plos.org
Target selection is the first and pivotal step in drug discovery. An incorrect choice may not
manifest itself for many years after hundreds of millions of research dollars have been spent …

Network-based association analysis to infer new disease-gene relationships using large-scale protein interactions

A Suratanee, K Plaimas - PLoS One, 2018 - journals.plos.org
Protein-protein interactions integrated with disease-gene associations represent important
information for revealing protein functions under disease conditions to improve the …

Training and evaluation corpora for the extraction of causal relationships encoded in biological expression language (BEL)

J Fluck, S Madan, S Ansari, AT Kodamullil, R Karki… - Database, 2016 - academic.oup.com
Success in extracting biological relationships is mainly dependent on the complexity of the
task as well as the availability of high-quality training data. Here, we describe the new …

Analyzing of molecular networks for human diseases and drug discovery

T Hao, Q Wang, L Zhao, D Wu… - Current topics in …, 2018 - ingentaconnect.com
Molecular networks represent the interactions and relations of genes/proteins, and also
encode molecular mechanisms of biological processes, development and diseases. Among …