Parallel performance and I/O profiling of HPC RNA-Seq applications

L Cruz, M Coelho, M Galheigo, A Carneiro… - Computación y …, 2022 - scielo.org.mx
Transcriptomics experiments are often expressed as scientific workflows and benefit from
high-performance computing environments. In these environments, workflow management …

ParslRNA-Seq: An Efficient and Scalable RNAseq Analysis Workflow for Studies of Differentiated Gene Expression

K Ocaña, L Cruz, M Coelho, R Terra… - Latin American High …, 2022 - Springer
RNA sequencing has become an increasingly affordable way to profile gene expression
analyses. Here we introduce a scientific workflow implementing several open-source …

ParslRNA-Seq: An Efficient and Scalable RNAseq Analysis Workflow for Studies of Differentiated Gene Expression

M Galheigo, A Carneiro, D Carvalho… - … Computing: 9th Latin …, 2022 - books.google.com
RNA sequencing has become an increasingly affordable way to profile gene expression
analyses. Here we introduce a scientific workflow implementing several open-source …

[引用][C] Workflows científicos de rna-seq em ambientes distribuídos de alto desempenho: Otimização de desempenho e análises de dados de expressão diferencial de …

L Cruz, M Coelho, R Terra, D Carvalho, L Gadelha… - Anais do XV Brazilian e …, 2021 - SBC

[引用][C] Otimizações em um Workflow Científico de Alto Desempenho

L Cruz, M Coelho, L Gadelha, C Osthoff, K Ocana - Anais da VIII Escola …, 2023 - SBC

[引用][C] Análise do Comportamento das Operações de Entrada e Saída de um Workflow Científico de Alto Desempenho

L Cruz, M Coelho, L Gadelha, C Osthoff, K Ocana - Escola Regional de Alto …, 2021 - SBC

[引用][C] Desempenho de Workflows Multithreading no Supercomputador SDumont em Experimentos de RNA-Seq

L Cruz, M Coelho, L Gadelha, K Ocana, C Osthoff - Anais da VI Escola …, 2020 - SBC