Bottom-up construction of complex biomolecular systems with cell-free synthetic biology

N Laohakunakorn, L Grasemann… - … in bioengineering and …, 2020 - frontiersin.org
Cell-free systems offer a promising approach to engineer biology since their open nature
allows for well-controlled and characterized reaction conditions. In this review, we discuss …

Methodologies for preparation of prokaryotic extracts for cell-free expression systems

SD Cole, AE Miklos, AC Chiao, ZZ Sun… - Synthetic and Systems …, 2020 - Elsevier
Cell-free systems that mimic essential cell functions, such as gene expression, have
dramatically expanded in recent years, both in terms of applications and widespread …

A partially self-regenerating synthetic cell

B Lavickova, N Laohakunakorn, SJ Maerkl - Nature Communications, 2020 - nature.com
Self-regeneration is a fundamental function of all living systems. Here we demonstrate
partial molecular self-regeneration in a synthetic cell. By implementing a minimal …

Building synthetic cells─ from the technology infrastructure to cellular entities

LJ Rothschild, NJH Averesch, EA Strychalski… - ACS Synthetic …, 2024 - ACS Publications
The de novo construction of a living organism is a compelling vision. Despite the astonishing
technologies developed to modify living cells, building a functioning cell “from scratch” has …

Strategies for in vitro engineering of the translation machinery

MJ Hammerling, A Krüger, MC Jewett - Nucleic acids research, 2020 - academic.oup.com
Engineering the process of molecular translation, or protein biosynthesis, has emerged as a
major opportunity in synthetic and chemical biology to generate novel biological insights …

In vitro synthesis of 32 translation-factor proteins from a single template reveals impaired ribosomal processivity

A Doerr, D Foschepoth, AC Forster, C Danelon - Scientific Reports, 2021 - nature.com
Abstract The Protein synthesis Using Recombinant Elements (PURE) system enables
transcription and translation of a DNA template from purified components. Therefore, the …

Modelling cell-free RNA and protein synthesis with minimal systems

A Doerr, E De Reus, P Van Nies… - Physical …, 2019 - iopscience.iop.org
DNA-guided cell-free protein synthesis using a minimal set of purified components has
emerged as a versatile platform in constructive biology. The E. coli-based PURE (protein …

Continuous Fluorescence Assay for In Vitro Translation Compatible with Noncanonical Amino Acids

GN Kerestesy, KK Dods, CAL McFeely… - ACS Synthetic …, 2024 - ACS Publications
The tolerance of the translation apparatus toward noncanonical amino acids (ncAAs) has
enabled the creation of diverse natural-product-like peptide libraries using mRNA display for …

In vivo, in vitro and in silico: an open space for the development of microbe‐based applications of synthetic biology

A Danchin - Microbial Biotechnology, 2022 - Wiley Online Library
Living systems are studied using three complementary approaches: living cells, cell‐free
systems and computer‐mediated modelling. Progresses in understanding, allowing …

On biochemical constructors and synthetic cells

SJ Maerkl - Interface Focus, 2023 - royalsocietypublishing.org
Is it possible to build life? More specifically, is it possible to create a living synthetic cell from
inanimate building blocks? This question precipitated into one of the most significant grand …