Progress in clasp Series 3

M Gebser, R Kaminski, B Kaufmann, J Romero… - Logic Programming and …, 2015 - Springer
We describe the novel functionalities comprised in clasp's series 3. This includes parallel
solving of disjunctive logic programs, parallel optimization with orthogonal strategies …

Estimating KIR haplotype frequencies on a cohort of 10,000 individuals: a comprehensive study on population variations, typing resolutions, and reference haplotypes

C Vierra-Green, D Roe, J Jayaraman, J Trowsdale… - PLoS …, 2016 - journals.plos.org
The killer cell immunoglobulin-like receptors (KIR) mediate human natural killer (NK) cell
cytotoxicity via activating or inhibiting signals. Although informative and functional haplotype …

Applications of answer set programming in phylogenetic systematics

E Erdem - … , and Nonmonotonic Reasoning: Essays Dedicated to …, 2011 - Springer
We summarize some applications of Answer Set Programming (ASP) in phylogenetics
systematics, focusing on the challenges, how they are handled using computational …

Haplotype inference using a novel binary particle swarm optimization algorithm

B Wei, J Zhao - Applied Soft Computing, 2014 - Elsevier
The knowledge of haplotypes allows researchers to identify the genetic variation affecting
phenotypic such as health, disease and response to drugs. However, getting haplotype data …

Cluster-Based ASP Solving with claspar

M Gebser, R Kaminski, B Kaufmann, T Schaub… - Logic Programming and …, 2011 - Springer
We report on three recent advances in the distributed ASP solver claspar. First, we describe
its flexible architecture supporting various search strategies, including competitive search …

Exploring life: answer set programming in bioinformatics

A Dal Palu, A Dovier, A Formisano… - … logic programming: theory …, 2018 - dl.acm.org
This chapter provides a broad overview of howlogic programming, and more specifically
Answer Set Programming (ASP), can be used to model and solve some popular and …

Bioinformatics: A challenge to constraint programming

P Barahona, L Krippahl, O Perriquet - Hybrid Optimization: The Ten Years …, 2011 - Springer
Bioinformatics is a rapidly growing field at the intersection of biology and computer science.
As such, it poses a wealth of problems, opportunities, and challenges for both areas. This …

Answer set programming's contributions to classical logic: An analysis of ASP methodology

M Denecker, J Vennekens, H Vlaeminck… - … : Essays Dedicated to …, 2011 - Springer
Much research in logic programming and non-monotonic reasoning originates from
dissatisfaction with classical logic as a knowledge representation language, and with …

Logic programming

A Lallouet, Y Moinard, P Nicolas, I Stéphan - A Guided Tour of Artificial …, 2020 - Springer
This chapter presents the family of logic programming languages in which computation is
viewed as deduction in a logical formalism. We first present the foundation of logic …

Loop-separable programs and their first-order definability

Y Chen, F Lin, Y Zhang, Y Zhou - Artificial Intelligence, 2011 - Elsevier
An answer set program with variables is first-order definable on finite structures if the set of
its finite answer sets can be captured by a first-order sentence. Characterizing classes of …