[HTML][HTML] The phylogeny and evolutionary history of arthropods

G Giribet, GD Edgecombe - Current Biology, 2019 - cell.com
Arthropods are the most diverse animal phylum, and their phylogenetic relationships have
been debated for centuries. With the advent of molecular phylogenetics, arthropods were …

The evolution of insect biodiversity

E Tihelka, C Cai, M Giacomelli, J Lozano-Fernandez… - Current Biology, 2021 - cell.com
Insects comprise over half of all described animal species. Together with the Protura
(coneheads), Collembola (springtails) and Diplura (two-pronged bristletails), insects form …

Using PhyloSuite for molecular phylogeny and tree‐based analyses

CY Xiang, F Gao, I Jakovlić, HP Lei, Y Hu, H Zhang… - Imeta, 2023 - Wiley Online Library
Phylogenetic analysis has entered the genomics (multilocus) era. For less experienced
researchers, conquering the large number of software programs required for a multilocus …

Evidence for sponges as sister to all other animals from partitioned phylogenomics with mixture models and recoding

AK Redmond, A McLysaght - Nature communications, 2021 - nature.com
Resolving the relationships between the major lineages in the animal tree of life is
necessary to understand the origin and evolution of key animal traits. Sponges …

Phylogenomic subsampling and the search for phylogenetically reliable loci

N Mongiardino Koch - Molecular biology and evolution, 2021 - academic.oup.com
Phylogenomic subsampling is a procedure by which small sets of loci are selected from
large genome-scale data sets and used for phylogenetic inference. This step is often …

[PDF][PDF] Comprehensive species sampling and sophisticated algorithmic approaches refute the monophyly of Arachnida

JA Ballesteros, CE Santibáñez-López… - Molecular Biology …, 2022 - academic.oup.com
Deciphering the evolutionary relationships of Chelicerata (arachnids, horseshoe crabs, and
allied taxa) has proven notoriously difficult, due to their ancient rapid radiation and the …

Taxonomic sampling and rare genomic changes overcome long-branch attraction in the phylogenetic placement of pseudoscorpions

AZ Ontano, G Gainett, S Aharon… - Molecular Biology …, 2021 - academic.oup.com
Long-branch attraction is a systematic artifact that results in erroneous groupings of fast-
evolving taxa. The combination of short, deep internodes in tandem with long-branch …

Interrogating genomic-scale data to resolve recalcitrant nodes in the spider tree of life

S Kulkarni, RJ Kallal, H Wood, D Dimitrov… - Molecular Biology …, 2021 - academic.oup.com
Genome-scale data sets are converging on robust, stable phylogenetic hypotheses for many
lineages; however, some nodes have shown disagreement across classes of data. We use …

Single-cell transcriptomics reveals the brain evolution of web-building spiders

P Jin, B Zhu, Y Jia, Y Zhang, W Wang, Y Shen… - Nature Ecology & …, 2023 - nature.com
Spiders are renowned for their efficient capture of flying insects using intricate aerial webs.
How the spider nervous systems evolved to cope with this specialized hunting strategy and …

Arthropod origins: integrating paleontological and molecular evidence

GD Edgecombe - Annual Review of Ecology, Evolution, and …, 2020 - annualreviews.org
Phylogenomics underpins a stable and mostly well-resolved hypothesis for the
interrelationships of extant arthropods. Exceptionally preserved fossils are integrated into …