Nowadays defying homology relationships among sequences is essential for biological
research. Within homology the analysis of orthologs sequences is of great importance for …

With the increasing number of sequenced genomes and their comparisons, the detection of
orthologs is crucial for reliable functional annotation and evolutionary analyses of genes and …

Motivation: Genome studies have become cheaper and easier than ever before, due to the
decreased costs of high-throughput sequencing and the free availability of analysis …

This chapter reviews current research on how protein domain architectures evolve. We
begin by summarizing work on the phylogenetic distribution of proteins, as this will directly …

Background Orthology inference is normally based on full-length protein sequences.
However, most proteins contain independently folding and recurring regions, domains. The …

Objective In the poultry industry, the most important economic traits are meat quality and
carcass yield. Thus, many studies were conducted to investigate the regulatory pathways …

Protein‐protein interactions (PPIs) play a crucial role in various biological processes. To
better comprehend the pathogenesis and treatments of various diseases, it is necessary to …

Phylogenomics: A Primer, Second Edition is for advanced undergraduate and graduate
biology students studying molecular biology, comparative biology, evolution, genomics, and …

PhyloPro is a database and accompanying web-based application for the construction and
exploration of phylogenetic profiles across the Eukarya. In this update article, we present six …

The protein domain is still considered one of the most critical evolutionary units in the
cellular, molecular mechanism. Hence, providing the quantitative measurements of the …