Chromosome architecture in an archaeal species naturally lacking structural maintenance of chromosomes proteins

C Badel, SD Bell - Nature Microbiology, 2024 - nature.com
Proteins in the structural maintenance of chromosomes (SMC) superfamily play key roles in
chromosome organization and are ubiquitous across all domains of life. However, SMC …

Chromosome organization affects genome evolution in Sulfolobus archaea

C Badel, RY Samson, SD Bell - Nature microbiology, 2022 - nature.com
In all organisms, the DNA sequence and the structural organization of chromosomes affect
gene expression. The extremely thermophilic crenarchaeon Sulfolobus has one circular …

Capturing chromosome conformation in Crenarchaea

E Pilatowski‐Herzing, RY Samson… - Molecular …, 2024 - Wiley Online Library
While there is a considerable body of knowledge regarding the molecular and structural
biology and biochemistry of archaeal information processing machineries, far less is known …

[HTML][HTML] Chromosome conformation capture assay combined with biotin enrichment for hyperthermophilic archaea

N Takemata, SD Bell - STAR protocols, 2021 - Elsevier
Chromosome organization in archaea has long been enigmatic due, in part, to the typically
small cell size of archaea and the extremophilic nature of many of the model archaeal …

Hi-C/3C-seq Data Analysis for Prokaryotic Genomes with HiC-Pro

N Takemata - Computational Methods for 3D Genome Analysis, 2024 - Springer
Hi-C and 3C-seq are powerful tools to study the 3D genomes of bacteria and archaea,
whose small cell sizes and growth conditions are often intractable to detailed microscopic …