3DMMS: robust 3D membrane morphological segmentation of C. elegans embryo

J Cao, MK Wong, Z Zhao, H Yan - BMC bioinformatics, 2019 - Springer
Background Understanding the cellular architecture is a fundamental problem in various
biological studies. C. elegans is widely used as a model organism in these studies because …

Directional And Topological Transformer With Topology Priors For 4D Cellular Image Segmentation

Z Li, Z Huang, Z Zhu, S You, Z Zhao… - 2024 IEEE International …, 2024 - ieeexplore.ieee.org
Cellular segmentation is a crucial step in creating cell shape maps and morphological
graphs for living embryos from time-lapse 3D fluorescence images (laser confocal). One …

Deploying Patch-Based Segmentation Pipeline for Fibroblast Cell Images at Varying Magnifications

H Malik, AS Idris, SF Toha, IM Idris, MF Daud… - IEEE …, 2023 - ieeexplore.ieee.org
Cell culture monitoring necessitates thorough attention for the continuous characterization of
cultivated cells. Machine learning has recently emerged to engage in a process, such as a …

Live Cell Segmentation and Tracking Techniques

Y Wang, O Williams, N Annasamudram… - Intelligent Image and …, 2023 - taylorfrancis.com
The topic of this chapter is automated segmentation and tracking of live cells in time-lapse
microscopy. Such techniques enable the computation of static and dynamic cell …

3D cell morphology detection by association for embryo heart morphogenesis

R Sarkar, D Darby, S Meilhac, JC Olivo-Marin - Biological Imaging, 2022 - cambridge.org
Advances in tissue engineering for cardiac regenerative medicine require cellular-level
understanding of the mechanism of cardiac muscle growth during embryonic developmental …