Water dynamics in the hydration shells of biomolecules

D Laage, T Elsaesser, JT Hynes - Chemical Reviews, 2017 - ACS Publications
The structure and function of biomolecules are strongly influenced by their hydration shells.
Structural fluctuations and molecular excitations of hydrating water molecules cover a broad …

Solvation dynamics in dipolar liquids

B Bagchi, B Jana - Chemical Society Reviews, 2010 - pubs.rsc.org
The time dependent response of a polar solvent to a changing charge distribution is studied
in solvation dynamics. The change in the energy of the solute is measured by a time domain …

Dual function of the hydration layer around an antifreeze protein revealed by atomistic molecular dynamics simulations

DR Nutt, JC Smith - Journal of the American Chemical Society, 2008 - ACS Publications
Atomistic molecular dynamics simulations are used to investigate the mechanism by which
the antifreeze protein from the spruce budworm, Choristoneura fumiferana, binds to ice …

[图书][B] Ultrafast infrared vibrational spectroscopy

MD Fayer - 2013 - books.google.com
The advent of laser-based sources of ultrafast infrared pulses has extended the study of very
fast molecular dynamics to the observation of processes manifested through their effects on …

Solar-powered simultaneous highly efficient seawater desalination and highly specific target extraction with smart DNA hydrogels

H Liang, Y Mu, M Yin, PP He, W Guo - Science Advances, 2023 - science.org
Obtaining freshwater and important minerals from seawater with solar power facilitates the
sustainable development of human society. Hydrogels have demonstrated great solar …

Dynamical disorder in the DNA hydration shell

E Duboué-Dijon, AC Fogarty, JT Hynes… - Journal of the American …, 2016 - ACS Publications
The reorientation and hydrogen-bond dynamics of water molecules within the hydration
shell of a B-DNA dodecamer, which are of interest for many of its biochemical functions, are …

Nitrile groups as vibrational probes of biomolecular structure and dynamics: an overview

BA Lindquist, KE Furse, SA Corcelli - Physical chemistry chemical …, 2009 - pubs.rsc.org
This paper presents an overview of recent experiments and theoretical developments aimed
at using vibrational spectroscopy to understand the structure and dynamics of nitrile-labeled …

Nucleic acid solvation: from outside to insight

P Auffinger, Y Hashem - Current Opinion in Structural Biology, 2007 - Elsevier
Nucleic acids are polyanionic molecules that were historically considered to be solely
surrounded by a shell of water molecules and a neutralizing cloud of monovalent and …

Ultrafast vibrational dynamics and local interactions of hydrated DNA

Ł Szyc, M Yang, ETJ Nibbering… - Angewandte Chemie …, 2010 - Wiley Online Library
Biochemical processes occur mainly in aqueous environments, where interactions with
water molecules play a key role for both the structure and function of biomolecules …

Number of hydrogen bonds per unit solvent accessible surface area: a descriptor of functional states of proteins

P Pal, S Chakraborty, B Jana - The Journal of Physical Chemistry …, 2022 - ACS Publications
Proteins function close to native and near-native conformations. These states are
evolutionarily selected to ensure the effect of mutations is minimized. The structural …