False discovery rate control is a recommended alternative to Bonferroni-type adjustments in health studies

ME Glickman, SR Rao, MR Schultz - Journal of clinical epidemiology, 2014 - Elsevier
Objectives Procedures for controlling the false positive rate when performing many
hypothesis tests are commonplace in health and medical studies. Such procedures, most …

A review of modern multiple hypothesis testing, with particular attention to the false discovery proportion

A Farcomeni - Statistical methods in medical research, 2008 - journals.sagepub.com
In the last decade a growing amount of statistical research has been devoted to multiple
testing, motivated by a variety of applications in medicine, bioinformatics, genomics, brain …

… and the cross-section of expected returns

CR Harvey, Y Liu, H Zhu - The Review of Financial Studies, 2016 - academic.oup.com
Hundreds of papers and factors attempt to explain the cross-section of expected returns.
Given this extensive data mining, it does not make sense to use the usual criteria for …

Human symptoms–disease network

XZ Zhou, J Menche, AL Barabási, A Sharma - Nature communications, 2014 - nature.com
In the post-genomic era, the elucidation of the relationship between the molecular origins of
diseases and their resulting phenotypes is a crucial task for medical research. Here, we use …

[PDF][PDF] Differential analysis of count data–the DESeq2 package

M Love, S Anders, W Huber - Genome Biol, 2014 - cdimage.debian.org
A basic task in the analysis of count data from RNA-seq is the detection of differentially
expressed genes. The count data are presented as a table which reports, for each sample …

Genome-wide pleiotropy between Parkinson disease and autoimmune diseases

A Witoelar, IE Jansen, Y Wang, RS Desikan… - JAMA …, 2017 - jamanetwork.com
Importance Recent genome-wide association studies (GWAS) and pathway analyses
supported long-standing observations of an association between immune-mediated …

More powerful procedures for multiple significance testing

Y Hochberg, Y Benjamini - Statistics in medicine, 1990 - Wiley Online Library
The problem of multiple comparisons is discussed in the context of medical research. The
need for more powerful procedures than classical multiple comparison procedures is …

Adaptive linear step-up procedures that control the false discovery rate

Y Benjamini, AM Krieger, D Yekutieli - Biometrika, 2006 - academic.oup.com
The linear step-up multiple testing procedure controls the false discovery rate at the desired
level q for independent and positively dependent test statistics. When all null hypotheses are …

[PDF][PDF] Multiple hypothesis testing

JP Shaffer - Annual review of psychology, 1995 - stabi.statistik.tu-dortmund.de
Multiple testing refers to the testing of more than one hypothesis at a time. It is a subfield of
the broader field of multiple inference, or simultaneous inference, which includes multiple …

[PDF][PDF] Differential expression of RNA-Seq data at the gene level–the DESeq package

S Anders, W Huber - Heidelberg …, 2012 - bioconductor.statistik.tu-dortmund.de
A basic task in the analysis of count data from RNA-Seq is the detection of differentially
expressed genes. The count data are presented as a table which reports, for each sample …