Proteins are the workhorses of the cell and execute many of their functions by interacting
with other proteins forming protein complexes. Multi-protein complexes are an admixture of …

Simple Summary Pleural effusion (PE) occurs as a consequence of various pathologies.
Malignant effusion due to lung cancer is one of the most frequent causes. A method for …

Background Constructing molecular interaction networks from microarray data and then
identifying disease module biomarkers can provide insight into the underlying pathogenic …

Non-small-cell lung cancer (NSCLC) represents a heterogeneous group of malignancies
that are the leading cause of cancer-related death worldwide. Although many NSCLC …

We have recently reported that a specific pool of ceramide, located in the plasma
membrane, mediated the effects of sublethal doses of the chemotherapeutic compound …

The standard pipeline to analyze scRNA-seq or spatial transcriptomics data focuses on a
gene-centric approach, which overlooks the collective behavior of genes. However, cell …

Biological interaction databases accommodate information about interacted proteins or
genes. Clustering on the networks formed by the interaction information for finding regions …

Non-small-cell lung cancer (NSCLC) represents a heterogeneous group of malignancies
that are the leading cause of cancer-related death worldwide. Although many NSCLC …

Central nervous system (CNS) cancers are one of the leading cancer types in the world.
Analysing gene hubs involved in CNS cancer is important for predicting therapies. We have …

Naturally, the epitope dataset can be presented as a graph. Dataset preparation in the
previous methods is part of model development. There are many graph-based classification …