Concept annotation in the CRAFT corpus

M Bada, M Eckert, D Evans, K Garcia, K Shipley… - BMC …, 2012 - Springer
Background Manually annotated corpora are critical for the training and evaluation of
automated methods to identify concepts in biomedical text. Results This paper presents the …

Event extraction from biomedical papers using a full parser

A Yakushiji, Y Tateisi, Y Miyao, J Tsujii - Biocomputing 2001, 2000 - World Scientific
We have designed and implemented an information extraction system using a full parser to
investigate the plausibility of full analysis of text using general-purpose parser and grammar …

[PDF][PDF] Use of support vector machines in extended named entity recognition

K Takeuchi, N Collier - COLING-02: The 6th Conference on …, 2002 - aclanthology.org
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{kxpgp} pjh~ kgxkht pgjpkpfkg {kxpgvjp go xjx {v nj hhgvjt pgoxorpkvfxgvjnpkl| hgxpfk …

Bio-medical entity extraction using support vector machines

K Takeuchi, N Collier - Artificial Intelligence in Medicine, 2005 - Elsevier
OBJECTIVE:: Support vector machines (SVMs) have achieved state-of-the-art performance
in several classification tasks. In this article we apply them to the identification and semantic …

Eight questions about semantic web annotations

J Euzenat - IEEE Intelligent systems, 2002 - ieeexplore.ieee.org
Improving information retrieval is one of the central goals of annotation. However, without
clear guidelines, annotation risks producing incoherent information. The author …

Biological relation extraction and query answering from MEDLINE abstracts using ontology-based text mining

M Abulaish, L Dey - Data & Knowledge Engineering, 2007 - Elsevier
The rapid growth of the biological text data repository makes it difficult for human beings to
access required information in a convenient and effective manner. The problem arises due …

[HTML][HTML] Comparison of character-level and part of speech features for name recognition in biomedical texts

N Collier, K Takeuchi - Journal of Biomedical Informatics, 2004 - Elsevier
The immense volume of data which is now available from experiments in molecular biology
has led to an explosion in reported results most of which are available only in unstructured …

Classifier subset selection for biomedical named entity recognition

N Dimililer, E Varoğlu, H Altınçay - Applied Intelligence, 2009 - Springer
Classifier ensembling approach is considered for biomedical named entity recognition task.
A vote-based classifier selection scheme having an intermediate level of search complexity …

[PDF][PDF] Building English-Vietnamese named entity corpus with aligned bilingual news articles

QH Ngo, D Dien, W Winiwarter - … of the Fifth Workshop on South …, 2014 - aclanthology.org
Named entity recognition aims to classify words in a document into pre-defined target entity
classes. It is now considered to be fundamental for many natural language processing tasks …

BioDCA identifier: A system for automatic identification of discourse connective and arguments from biomedical text

S Gopalan, SL Devi - Proceedings of the Fifth Workshop on …, 2016 - aclanthology.org
This paper describes a Natural language processing system developed for automatic
identification of explicit connectives, its sense and arguments. Prior work has shown that the …