Protein secondary structure prediction: A survey of the state of the art

Q Jiang, X Jin, SJ Lee, S Yao - Journal of Molecular Graphics and …, 2017 - Elsevier
Protein secondary structure prediction (PSSP) is a fundamental task in protein science and
computational biology, and it can be used to understand protein 3-dimensional (3-D) …

Prediction of 8-state protein secondary structures by a novel deep learning architecture

B Zhang, J Li, Q Lü - BMC bioinformatics, 2018 - Springer
Background Protein secondary structure can be regarded as an information bridge that links
the primary sequence and tertiary structure. Accurate 8-state secondary structure prediction …

SAINT: self-attention augmented inception-inside-inception network improves protein secondary structure prediction

MR Uddin, S Mahbub, MS Rahman, MS Bayzid - Bioinformatics, 2020 - academic.oup.com
Motivation Protein structures provide basic insight into how they can interact with other
proteins, their functions and biological roles in an organism. Experimental methods (eg X …

An efficient Pearson correlation based improved random forest classification for protein structure prediction techniques

B Kalaiselvi, M Thangamani - Measurement, 2020 - Elsevier
In biochemistry, the protein structure prediction from the primary sequence is a significant
issue. Few research works are intended for performing protein structure prediction with …

A LSTM‐RNN‐Based Fiber Optic Gyroscope Drift Compensation

N Mao, J Xu, J Li, H He - Mathematical Problems in …, 2021 - Wiley Online Library
Fiber optic gyroscope (FOG) inertial measurement unit (IMU) containing a three‐orthogonal
gyroscope and three‐orthogonal accelerometer has been widely utilized in positioning and …

Novel spectral indices and transfer learning model in estimat moisture status across winter wheat and summer maize

Z Li, Q Cheng, L Chen, W Zhai, B Zhang, B Mao… - … and Electronics in …, 2025 - Elsevier
Timely and accurate estimation of crop moisture status is important for understanding crop
growth and development. It also provides guidance for irrigation strategies and precision …

Protein secondary structure prediction using modular reciprocal bidirectional recurrent neural networks

S Babaei, A Geranmayeh, SA Seyyedsalehi - Computer methods and …, 2010 - Elsevier
The supervised learning of recurrent neural networks well-suited for prediction of protein
secondary structures from the underlying amino acids sequence is studied. Modular …

A novel structural position-specific scoring matrix for the prediction of protein secondary structures

D Li, T Li, P Cong, W Xiong, J Sun - Bioinformatics, 2012 - academic.oup.com
Motivation: The precise prediction of protein secondary structure is of key importance for the
prediction of 3D structure and biological function. Although the development of many …

Protein solvent-accessibility prediction by a stacked deep bidirectional recurrent neural network

B Zhang, L Li, Q Lü - Biomolecules, 2018 - mdpi.com
Residue solvent accessibility is closely related to the spatial arrangement and packing of
residues. Predicting the solvent accessibility of a protein is an important step to understand …

Knowledge base and neural network approach for protein secondary structure prediction

MS Patel, HS Mazumdar - Journal of theoretical biology, 2014 - Elsevier
Protein structure prediction is of great relevance given the abundant genomic and proteomic
data generated by the genome sequencing projects. Protein secondary structure prediction …