The human virome: assembly, composition and host interactions

G Liang, FD Bushman - Nature Reviews Microbiology, 2021 - nature.com
The human body hosts vast microbial communities, termed the microbiome. Less well
known is the fact that the human body also hosts vast numbers of different viruses …

Bacteriophages of the human gut: the “known unknown” of the microbiome

AN Shkoporov, C Hill - Cell host & microbe, 2019 - cell.com
The human gut microbiome is a dense and taxonomically diverse consortium of
microorganisms. While the bacterial components of the microbiome have received …

Expanding known viral diversity in the healthy infant gut

SA Shah, L Deng, J Thorsen, AG Pedersen… - Nature …, 2023 - nature.com
The gut microbiome is shaped through infancy and impacts the maturation of the immune
system, thus protecting against chronic disease later in life. Phages, or viruses that infect …

The human gut virome is highly diverse, stable, and individual specific

AN Shkoporov, AG Clooney, TDS Sutton, FJ Ryan… - Cell host & …, 2019 - cell.com
The human gut contains a vast array of viruses, mostly bacteriophages. The majority remain
uncharacterized, and their roles in shaping the gut microbiome and in impacting on human …

Microbial ecology along the gastrointestinal tract

ET Hillman, H Lu, T Yao, CH Nakatsu - Microbes and environments, 2017 - jstage.jst.go.jp
The ecosystem of the human gastrointestinal (GI) tract traverses a number of environmental,
chemical, and physical conditions because it runs from the oral cavity to the anus. These …

Mother's milk: a purposeful contribution to the development of the infant microbiota and immunity

K Le Doare, B Holder, A Bassett… - Frontiers in …, 2018 - frontiersin.org
Breast milk is the perfect nutrition for infants, a result of millions of years of evolution. In
addition to providing a source of nutrition, breast milk contains a diverse array of microbiota …

The stepwise assembly of the neonatal virome is modulated by breastfeeding

G Liang, C Zhao, H Zhang, L Mattei, S Sherrill-Mix… - Nature, 2020 - nature.com
The gut of healthy human neonates is usually devoid of viruses at birth, but quickly becomes
colonized, which—in some cases—leads to gastrointestinal disorders,,–. Here we show that …

Interactions between bacteriophage, bacteria, and the mammalian immune system

JD Van Belleghem, K Dąbrowska, M Vaneechoutte… - Viruses, 2018 - mdpi.com
The human body is host to large numbers of bacteriophages (phages)–a diverse group of
bacterial viruses that infect bacteria. Phage were previously regarded as bystanders that …

Early life dynamics of the human gut virome and bacterial microbiome in infants

ES Lim, Y Zhou, G Zhao, IK Bauer, L Droit, IM Ndao… - Nature medicine, 2015 - nature.com
The early years of life are important for immune development and influence health in
adulthood. Although it has been established that the gut bacterial microbiome is rapidly …

The impact of the gut microbiota on human health: an integrative view

JC Clemente, LK Ursell, LW Parfrey, R Knight - Cell, 2012 - cell.com
The human gut harbors diverse microbes that play a fundamental role in the well-being of
their host. The constituents of the microbiota—bacteria, viruses, and eukaryotes—have been …