Advances in human intracranial electroencephalography research, guidelines and good practices

MR Mercier, AS Dubarry, F Tadel, P Avanzini… - Neuroimage, 2022 - Elsevier
Since the second half of the twentieth century, intracranial electroencephalography (iEEG),
including both electrocorticography (ECoG) and stereo-electroencephalography (sEEG) …

A tutorial review of functional connectivity analysis methods and their interpretational pitfalls

AM Bastos, JM Schoffelen - Frontiers in systems neuroscience, 2016 - frontiersin.org
Oscillatory neuronal activity may provide a mechanism for dynamic network coordination.
Rhythmic neuronal interactions can be quantified using multiple metrics, each with their own …

The MVGC multivariate Granger causality toolbox: a new approach to Granger-causal inference

L Barnett, AK Seth - Journal of neuroscience methods, 2014 - Elsevier
Abstract Background Wiener–Granger causality (“G-causality”) is a statistical notion of
causality applicable to time series data, whereby cause precedes, and helps predict, effect. It …

A study of problems encountered in Granger causality analysis from a neuroscience perspective

PA Stokes, PL Purdon - … of the national academy of sciences, 2017 - National Acad Sciences
Granger causality methods were developed to analyze the flow of information between time
series. These methods have become more widely applied in neuroscience. Frequency …

Graph analysis of functional brain networks: practical issues in translational neuroscience

F de Vico Fallani, J Richiardi… - … Transactions of the …, 2014 - royalsocietypublishing.org
The brain can be regarded as a network: a connected system where nodes, or units,
represent different specialized regions and links, or connections, represent communication …

Network modelling methods for FMRI

SM Smith, KL Miller, G Salimi-Khorshidi, M Webster… - Neuroimage, 2011 - Elsevier
There is great interest in estimating brain “networks” from FMRI data. This is often attempted
by identifying a set of functional “nodes”(eg, spatial ROIs or ICA maps) and then conducting …

Connectivity analysis in EEG data: a tutorial review of the state of the art and emerging trends

G Chiarion, L Sparacino, Y Antonacci, L Faes, L Mesin - Bioengineering, 2023 - mdpi.com
Understanding how different areas of the human brain communicate with each other is a
crucial issue in neuroscience. The concepts of structural, functional and effective …

Wiener–Granger causality: a well established methodology

SL Bressler, AK Seth - Neuroimage, 2011 - Elsevier
For decades, the main ways to study the effect of one part of the nervous system upon
another have been either to stimulate or lesion the first part and investigate the outcome in …

A MATLAB toolbox for Granger causal connectivity analysis

AK Seth - Journal of neuroscience methods, 2010 - Elsevier
Assessing directed functional connectivity from time series data is a key challenge in
neuroscience. One approach to this problem leverages a combination of Granger causality …

Causal network inference by optimal causation entropy

J Sun, D Taylor, EM Bollt - SIAM Journal on Applied Dynamical Systems, 2015 - SIAM
The broad abundance of time series data, which is in sharp contrast to limited knowledge of
the underlying network dynamic processes that produce such observations, calls for a …