Lysine acetylation goes global: from epigenetics to metabolism and therapeutics

I Ali, RJ Conrad, E Verdin, M Ott - Chemical reviews, 2018 - ACS Publications
Post-translational acetylation of lysine residues has emerged as a key regulatory
mechanism in all eukaryotic organisms. Originally discovered in 1963 as a unique …

H3K9me3-dependent heterochromatin: barrier to cell fate changes

JS Becker, D Nicetto, KS Zaret - Trends in Genetics, 2016 - cell.com
Establishing and maintaining cell identity depends on the proper regulation of gene
expression, as specified by transcription factors and reinforced by epigenetic mechanisms …

Nuclear m6A reader YTHDC1 regulates the scaffold function of LINE1 RNA in mouse ESCs and early embryos

C Chen, W Liu, J Guo, Y Liu, X Liu, J Liu, X Dou… - Protein & …, 2021 - academic.oup.com
Abstract N6-methyladenosine (m6A) on chromosome-associated regulatory RNAs
(carRNAs), including repeat RNAs, plays important roles in tuning the chromatin state and …

Meiotic recombination in mammals: localization and regulation

F Baudat, Y Imai, B De Massy - Nature Reviews Genetics, 2013 - nature.com
During meiosis, a programmed induction of DNA double-strand breaks (DSBs) leads to the
exchange of genetic material between homologous chromosomes. These exchanges …

A high-density map for navigating the human polycomb complexome

S Hauri, F Comoglio, M Seimiya, M Gerstung, T Glatter… - Cell reports, 2016 - cell.com
Polycomb group (PcG) proteins are major determinants of gene silencing and epigenetic
memory in higher eukaryotes. Here, we systematically mapped the human PcG complexome …

Transposable elements and their KRAB-ZFP controllers regulate gene expression in adult tissues

G Ecco, M Cassano, A Kauzlaric, J Duc, A Coluccio… - Developmental cell, 2016 - cell.com
KRAB-containing zinc finger proteins (KRAB-ZFPs) are early embryonic controllers of
transposable elements (TEs), which they repress with their cofactor KAP1 through histone …

KAP1 protein: an enigmatic master regulator of the genome

S Iyengar, PJ Farnham - Journal of Biological Chemistry, 2011 - ASBMB
In mammalian cells, multiple cellular processes, including gene silencing, cell growth and
differentiation, pluripotency, neoplastic transformation, apoptosis, DNA repair, and …

The HUSH complex cooperates with TRIM28 to repress young retrotransposons and new genes

L Robbez-Masson, CHC Tie, L Conde… - Genome …, 2018 - genome.cshlp.org
Retrotransposons encompass half of the human genome and contribute to the formation of
heterochromatin, which provides nuclear structure and regulates gene expression. Here, we …

The complexity of TRIM28 contribution to cancer

P Czerwińska, S Mazurek, M Wiznerowicz - Journal of biomedical science, 2017 - Springer
Since the first discovery in 1996, the engagement of TRIM28 in distinct aspects of cellular
biology has been extensively studied resulting in identification of a complex nature of …

Ezh2-dCas9 and KRAB-dCas9 enable engineering of epigenetic memory in a context-dependent manner

H O'Geen, SL Bates, SS Carter, KA Nisson… - Epigenetics & …, 2019 - Springer
Background Rewriting of the epigenome has risen as a promising alternative to gene editing
for precision medicine. In nature, epigenetic silencing can result in complete attenuation of …