CZ CELLxGENE Discover: a single-cell data platform for scalable exploration, analysis and modeling of aggregated data

CZI Cell Science Program, S Abdulla… - Nucleic Acids …, 2025 - academic.oup.com
Hundreds of millions of single cells have been analyzed using high-throughput
transcriptomic methods. The cumulative knowledge within these datasets provides an …

A compendium of methods: Searching allele specific expression via RNA sequencing

S Asthana, HN Yadav, N Sharma, VK Singh - Gene, 2024 - Elsevier
Diploid mammalian genome has paired alleles for each gene; typically allowing for equal
expression of the two alleles within the cell/tissue. However, genetic regulatory elements …

Machine Learning Uncovers Vascular Endothelial Cell Identity Genes by Expression Regulation Features in Single Cells

KS Arulsamy, B Xia, H Chen, L Zhang, K Chen - BioRxiv, 2024 - biorxiv.org
Deciphering cell identity genes is pivotal to understanding cell differentiation, development,
and many diseases involving cell identity dysregulation. Here, we introduce SCIG, a …