Adaptive immune receptor repertoire analysis

V Mhanna, H Bashour, K Lê Quý, P Barennes… - Nature Reviews …, 2024 - nature.com
B cell and T cell receptor repertoires compose the adaptive immune receptor repertoire
(AIRR) of an individual. The AIRR is a unique collection of antigen-specific receptors that …

mRNA vaccines induce durable immune memory to SARS-CoV-2 and variants of concern

RR Goel, MM Painter, SA Apostolidis, D Mathew… - Science, 2021 - science.org
INTRODUCTION Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) mRNA
vaccines are highly effective at preventing infection and especially severe disease …

Distinct antibody and memory B cell responses in SARS-CoV-2 naïve and recovered individuals after mRNA vaccination

RR Goel, SA Apostolidis, MM Painter, D Mathew… - Science …, 2021 - science.org
mRNA vaccines for SARS-CoV-2 have been authorized for emergency use. Despite their
efficacy in clinical trials, data on mRNA vaccine–induced immune responses are mostly …

Comprehensive mapping of immune perturbations associated with severe COVID-19

L Kuri-Cervantes, MB Pampena, W Meng… - Science …, 2020 - science.org
Although critical illness has been associated with SARS-CoV-2–induced hyperinflammation,
the immune correlates of severe COVID-19 remain unclear. Here, we comprehensively …

Biological controls for standardization and interpretation of adaptive immune receptor repertoire profiling

J Trück, A Eugster, P Barennes, CM Tipton… - Elife, 2021 - elifesciences.org
Use of adaptive immune receptor repertoire sequencing (AIRR-seq) has become
widespread, providing new insights into the immune system with potential broad clinical and …

The transcription factor T-bet resolves memory B cell subsets with distinct tissue distributions and antibody specificities in mice and humans

JL Johnson, RL Rosenthal, JJ Knox, A Myles… - Immunity, 2020 - cell.com
B cell subsets expressing the transcription factor T-bet are associated with humoral immune
responses and autoimmunity. Here, we examined the anatomic distribution, clonal …

CAR T-cell therapy is effective for CD19-dim B-lymphoblastic leukemia but is impacted by prior blinatumomab therapy

V Pillai, K Muralidharan, W Meng, A Bagashev… - Blood …, 2019 - ashpublications.org
Tisagenlecleucel, a chimeric antigen receptor (CAR) T-cell product targeting CD19 is
approved for relapsed/refractory B-cell acute lymphoblastic leukemia (B-ALL). However, the …

Biochemical and functional characterization of mutant KRAS epitopes validates this oncoprotein for immunological targeting

AS Bear, T Blanchard, J Cesare, MJ Ford… - Nature …, 2021 - nature.com
Activating RAS missense mutations are among the most prevalent genomic alterations
observed in human cancers and drive oncogenesis in the three most lethal tumor types …

Altered function and differentiation of age-associated B cells contribute to the female bias in lupus mice

E Ricker, M Manni, D Flores-Castro, D Jenkins… - Nature …, 2021 - nature.com
Differences in immune responses to viruses and autoimmune diseases such as systemic
lupus erythematosus (SLE) can show sexual dimorphism. Age-associated B cells (ABC) are …

Plasticity of intragraft alloreactive T cell clones in human gut correlates with transplant outcomes

J Fu, Z Wang, M Martinez, A Obradovic… - Journal of Experimental …, 2023 - rupress.org
The site of transition between tissue-resident memory (TRM) and circulating phenotypes of T
cells is unknown. We integrated clonotype, alloreactivity, and gene expression profiles of …