Utilizing databases for astrocyte secretome research

R Afridi, WH Lee, JH Kim, K Suk - Expert Review of Proteomics, 2023 - Taylor & Francis
Introduction Astrocytes are the most abundant cell type in the central nervous system (CNS).
They play a pivotal role in supporting neuronal function and maintaining homeostasis by …

Integrated meta-analysis of colorectal cancer public proteomic datasets for biomarker discovery and validation

J Robles, A Prakash, JA Vizcaíno… - PLOS Computational …, 2024 - journals.plos.org
The cancer biomarker field has been an object of thorough investigation in the last decades.
Despite this, colorectal cancer (CRC) heterogeneity makes it challenging to identify and …

Deciphering Protein Secretion from the Brain to Cerebrospinal Fluid for Biomarker Discovery

K Waury, R de Wit, IMW Verberk… - Journal of proteome …, 2023 - ACS Publications
Cerebrospinal fluid (CSF) is an essential matrix for the discovery of neurological disease
biomarkers. However, the high dynamic range of protein concentrations in CSF hinders the …

Tissue‐based absolute quantification using large‐scale TMT and LFQ experiments

H Wang, C Dai, J Pfeuffer, T Sachsenberg… - …, 2023 - Wiley Online Library
Relative and absolute intensity‐based protein quantification across cell lines, tissue atlases
and tumour datasets is increasingly available in public datasets. These atlases enable …

Proteomics and machine learning: Leveraging domain knowledge for feature selection in a skeletal muscle tissue meta-analysis

A Shahin-Shamsabadi, J Cappuccitti - Heliyon, 2024 - cell.com
Omics techniques, such as proteomics, contain crucial data for understanding biological
processes, but they remain underutilized due to their high dimensionality. Typically …

Application of Machine Learning in Pharmacoproteomics

LA Adutwum, MB Oppong, M Lartey… - … : Recent Trends and …, 2024 - Springer
Pharmacoproteomics, which analyzes protein expressions influenced by pharmacological
interventions, relies heavily on sophisticated data analysis. The integration of machine …

Transferable Mass Spectrometry Methods: Forensics in Time: Palaeoproteomics

LDE CLERCK, M DHAENENS - … Intelligence: State-of-the-art and …, 2023 - books.google.com
The information that defines all organisms, including humans, is encoded in their DNA,
which altogether comprises the genotype. Throughout life, from initial organ formation to …

Transferable Mass Spectrometry Methods–Sustainable Forensic Intelligence: Mass Spectrometry-based Methods for Monitoring Fentanyl-related Substances in …

LP Barron, D Grant, T Marczylo, TW Gant - 2023 - books.rsc.org
An overview of the latest technological advancements and knowledge in wastewater-based
epidemiology (WBE) for monitoring illicit drug usage, using mass spectrometry-based …

Transferable Mass Spectrometry Methods: Forensics in Time: Palaeoproteomics

A Burnett, RS Dennis, S Daled, D Deforce, L De Clerck… - 2023 - books.rsc.org
The information that defines all organisms, including humans, is encoded in their DNA,
which altogether comprises the genotype. Throughout life, from initial organ formation to …

[PDF][PDF] Using reprocessed public proteomic data to detect cell line specific protein patterns

S van Puyenbroeck - 2023 - libstore.ugent.be
These past two years have been the most captivating, yet challenging phase of my university
education. I would like to take this opportunity to express my gratitude to all the individuals …