A note on ENDOG: a computer program for analysing pedigree information

JP Gutiérrez, F Goyache - Journal of Animal Breeding and …, 2005 - Wiley Online Library
The aim of this note is to describe the program endog (v. 3.0). The program handles
pedigree information to conduct several demographic and genetic analyses including:(a) the …

Improving the estimation of realized effective population sizes in farm animals

JP Gutiérrez, I Cervantes… - Journal of Animal …, 2009 - Wiley Online Library
Computation of inbreeding rate (ΔF) must consider that inbreeding is delayed with one
generation with respect to the idealized population when addressed using individual …

Methods to estimate effective population size using pedigree data: Examples in dog, sheep, cattle and horse

G Leroy, T Mary-Huard, E Verrier, S Danvy… - Genetics Selection …, 2013 - Springer
Background Effective population sizes of 140 populations (including 60 dog breeds, 40
sheep breeds, 20 cattle breeds and 20 horse breeds) were computed using pedigree …

Using pedigree information to monitor genetic variability of endangered populations: the Xalda sheep breed of Asturias as an example

F Goyache, JP Gutiérrez, I Fernández… - Journal of Animal …, 2003 - Wiley Online Library
The aim of this work is to highlight the need of monitoring small populations to conserve their
genetic variability by using a set of parameters to characterize both the structure of …

Individual increase in inbreeding allows estimating effective sizes from pedigrees

JP Gutiérrez, I Cervantes, A Molina… - Genetics selection …, 2008 - gse-journal.org
We present here a simple approach to obtain reliable estimates of the effective population
size in real world populations via the computation of the increase in inbreeding for each …

[HTML][HTML] Inbreeding depression on female fertility and calving ease in Spanish dairy cattle

O González-Recio, EL De Maturana, JP Gutiérrez - Journal of dairy science, 2007 - Elsevier
Inbreeding depression on female fertility and calving ease in Spanish dairy cattle was
studied by the traditional inbreeding coefficient (F) and an alternative measurement …

Inbreeding trends and pedigree analysis of Irish dairy and beef cattle populations

S Mc Parland, JF Kearney, M Rath… - Journal of animal …, 2007 - academic.oup.com
The objective of this study was to determine the inbreeding levels and to analyze the
pedigree of Irish purebred populations of Charolais, Limousin, Hereford, Angus, and …

Estimation of effective population size from the rate of coancestry in pedigreed populations

I Cervantes, F Goyache, A Molina… - Journal of animal …, 2011 - Wiley Online Library
We introduce a simple method to estimate effective population size from increase in
coancestry (Δcjk) for all pairs of individuals j and k in a reference subpopulation. An increase …

Pedigree analysis in the Andalusian horse: population structure, genetic variability and influence of the Carthusian strain

M Valera, A Molina, JP Gutiérrez, J Gómez… - Livestock Production …, 2005 - Elsevier
The studbook of the Andalusian horse comprising a total of 75,389 individuals (6318 of them
classified as Carthusians) was analysed in order to ascertain the genetic history of the breed …

Application of individual increase in inbreeding to estimate realized effective sizes from real pedigrees

I Cervantes, F Goyache, A Molina… - Journal of Animal …, 2008 - Wiley Online Library
The objective of this study was to test the performance of a recently proposed methodology
for the estimation of realized effective size (Ne) based on individual increase in inbreeding …