Genome dynamics during experimental evolution

JE Barrick, RE Lenski - Nature Reviews Genetics, 2013 - nature.com
Evolutionary changes in organismal traits may occur either gradually or suddenly. However,
until recently, there has been little direct information about how phenotypic changes are …

Regulation by small RNAs in bacteria: expanding frontiers

G Storz, J Vogel, KM Wassarman - Molecular cell, 2011 - cell.com
Research on the discovery and characterization of small, regulatory RNAs in bacteria has
exploded in recent years. These sRNAs act by base pairing with target mRNAs with which …

New insights into bacterial adaptation through in vivo and in silico experimental evolution

T Hindré, C Knibbe, G Beslon… - Nature Reviews …, 2012 - nature.com
Microbiology research has recently undergone major developments that have led to great
progress towards obtaining an integrated view of microbial cell function. Microbial genetics …

Prevalence of small base-pairing RNAs derived from diverse genomic loci

PP Adams, G Storz - Biochimica Et Biophysica Acta (BBA)-Gene …, 2020 - Elsevier
Small RNAs (sRNAs) that act by base-pairing have been shown to play important roles in
fine-tuning the levels and translation of their target transcripts across a variety of model and …

Antisense transcription is pervasive but rarely conserved in enteric bacteria

R Raghavan, DB Sloan, H Ochman - MBio, 2012 - Am Soc Microbiol
ABSTRACT Noncoding RNAs, including antisense RNAs (asRNAs) that originate from the
complementary strand of protein-coding genes, are involved in the regulation of gene …

[HTML][HTML] Genetic manipulation and tools in myxobacteria for the exploitation of secondary metabolism

X Yue, D Sheng, L Zhuo, YZ Li - Engineering Microbiology, 2023 - Elsevier
Myxobacteria are famous for their capacity for social behavior and natural product
biosynthesis. The unique sociality of myxobacteria is not only an intriguing scientific topic but …

Adaptation in natural microbial populations

B Koskella, M Vos - Annual Review of Ecology, Evolution, and …, 2015 - annualreviews.org
Although their diversity greatly exceeds that of plants and animals, microbial organisms
have historically received less attention in ecology and evolutionary biology research. This …

Positively frequency-dependent interference competition maintains diversity and pervades a natural population of cooperative microbes

O Rendueles, M Amherd, GJ Velicer - Current Biology, 2015 - cell.com
Positively frequency-dependent selection is predicted from theory to promote diversity in
patchily structured populations and communities, but empirical support for this prediction …

Experimental evolution as a tool to investigate natural processes and molecular functions

P Remigi, C Masson-Boivin, EPC Rocha - Trends in microbiology, 2019 - cell.com
The experimental evolution (EE) of microbes has allowed evolutionary biologists to examine
adaptive processes in real time, generating novel insights into fundamental laws of …

A stress-induced small RNA modulates alpha-rhizobial cell cycle progression

M Robledo, B Frage, PR Wright, A Becker - PLoS genetics, 2015 - journals.plos.org
Mechanisms adjusting replication initiation and cell cycle progression in response to
environmental conditions are crucial for microbial survival. Functional characterization of the …