Anatomy of the antibody molecule

EA Padlan - Molecular immunology, 1994 - Elsevier
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Structural biology of allergens

RC Aalberse - Journal of allergy and clinical immunology, 2000 - Elsevier
One of the major challenges of molecular allergy is to predict the allergenic potential of a
protein, particularly in novel foods. Two aspects have to be distinguished: immunogenicity …

" Diabodies": small bivalent and bispecific antibody fragments.

P Holliger, T Prospero, G Winter - Proceedings of the …, 1993 - National Acad Sciences
Bivalent and bispecific antibodies and their fragments have immense potential for practical
application. Here we describe the design of small antibody fragments with two antigen …

Standard conformations for the canonical structures of immunoglobulins

B Al-Lazikani, AM Lesk, C Chothia - Journal of molecular biology, 1997 - Elsevier
A comparative analysis of the main-chain conformation of the L1, L2, L3, H1 and H2
hypervariable regions in 17 immunoglobulin structures that have been accurately …

Antibody framework residues affecting the conformation of the hypervariable loops

J Foote, G Winter - Journal of molecular biology, 1992 - Elsevier
Rodent monoclonal antibodies have been “humanized” or “reshaped” for therapy by
transplanting the antigen-binding loops from their variable domains onto the β-sheet …

Modelling protein docking using shape complementarity, electrostatics and biochemical information

HA Gabb, RM Jackson, MJE Sternberg - Journal of molecular biology, 1997 - Elsevier
A protein docking study was performed for two classes of biomolecular complexes: six
enzyme/inhibitor and four antibody/antigen. Biomolecular complexes for which crystal …

Evaluation and improvement of multiple sequence methods for protein secondary structure prediction

JA Cuff, GJ Barton - Proteins: Structure, Function, and …, 1999 - Wiley Online Library
A new dataset of 396 protein domains is developed and used to evaluate the performance of
the protein secondary structure prediction algorithms DSC, PHD, NNSSP, and PREDATOR …

Analysis of protein-protein interaction sites using surface patches

S Jones, JM Thornton - Journal of molecular biology, 1997 - Elsevier
Protein-protein interaction sites in complexes of known structure are characterised using a
series of parameters to evaluate what differentiates them from other sites on the protein …

Structural repertoire of the human VH segments

C Chothia, AM Lesk, E Gherardi, IM Tomlinson… - Journal of molecular …, 1992 - Elsevier
The VH gene segments produce the part of the VH domains of antibodies that contains the
first two hypervariable regions. The sequences of 83 human VH segments with open …

Interactions of protein antigens with antibodies.

DR Davies, GH Cohen - Proceedings of the National …, 1996 - National Acad Sciences
There are now several crystal structures of antibody Fab fragments complexed to their
protein antigens. These include Fab complexes with lysozyme, two Fab complexes with …