Xenbase: a genomic, epigenomic and transcriptomic model organism database

K Karimi, JD Fortriede, VS Lotay, KA Burns… - Nucleic acids …, 2018 - academic.oup.com
Abstract Xenbase (www. xenbase. org) is an online resource for researchers utilizing
Xenopus laevis and Xenopus tropicalis, and for biomedical scientists seeking access to data …

From direct to indirect lithium targets: a comprehensive review of omics data

M Roux, A Dosseto - Metallomics, 2017 - academic.oup.com
Metal ions are critical to a wide range of biological processes. Among them, lithium (Li) has
been recognised for its benefit as a treatment for bipolar disorder (BD). However, we are yet …

BMP signaling: lighting up the way for embryonic dorsoventral patterning

Y Yan, Q Wang - Frontiers in Cell and Developmental Biology, 2021 - frontiersin.org
One of the most significant events during early embryonic development is the establishment
of a basic embryonic body plan, which is defined by anteroposterior, dorsoventral (DV), and …

Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network

S Mukherjee, P Chaturvedi, SA Rankin, MB Fish… - Elife, 2020 - elifesciences.org
Lineage specification is governed by gene regulatory networks (GRNs) that integrate the
activity of signaling effectors and transcription factors (TFs) on enhancers. Sox17 is a key …

Molecular analysis of a self-organizing signaling pathway for Xenopus axial patterning from egg to tailbud

Y Azbazdar, EM De Robertis - Proceedings of the National Academy of …, 2024 - pnas.org
Xenopus embryos provide a favorable material to dissect the sequential steps that lead to
dorsal–ventral (DV) and anterior–posterior (AP) cell differentiation. Here, we analyze the …

The RBP1–CKAP4 axis activates oncogenic autophagy and promotes cancer progression in oral squamous cell carcinoma

L Gao, Q Wang, W Ren, J Zheng, S Li, Z Dou… - Cell death & …, 2020 - nature.com
Abstract Retinol-binding protein 1 (RBP1) is involved in several physiological functions,
including the regulation of the metabolism and retinol transport. Studies have shown that it …

[HTML][HTML] Lipoatrophy and metabolic disturbance in mice with adipose-specific deletion of kindlin-2

H Gao, Y Guo, Q Yan, W Yang, R Li, S Lin, X Bai… - JCI insight, 2019 - ncbi.nlm.nih.gov
Kindlin-2 regulates integrin-mediated cell adhesion to and migration on the extracellular
matrix. Our recent studies demonstrate important roles of kindlin-2 in regulation of …

[HTML][HTML] Chromatin accessibility and histone acetylation in the regulation of competence in early development

M Esmaeili, SA Blythe, JW Tobias, K Zhang, J Yang… - Developmental …, 2020 - Elsevier
As development proceeds, inductive cues are interpreted by competent tissues in a spatially
and temporally restricted manner. While key inductive signaling pathways within competent …

Wnt/β-catenin signaling is an evolutionarily conserved determinant of chordate dorsal organizer

I Kozmikova, Z Kozmik - Elife, 2020 - elifesciences.org
Deciphering the mechanisms of axis formation in amphioxus is a key step to understanding
the evolution of chordate body plan. The current view is that Nodal signaling is the only …

Bighead is a Wnt antagonist secreted by the Xenopus Spemann organizer that promotes Lrp6 endocytosis

Y Ding, G Colozza, EA Sosa… - Proceedings of the …, 2018 - National Acad Sciences
The Xenopus laevis embryo has been subjected to almost saturating screens for molecules
specifically expressed in dorsal Spemann organizer tissue. In this study, we performed high …