Machine learning for the study of plankton and marine snow from images

JO Irisson, SD Ayata, DJ Lindsay… - Annual Review of …, 2022 - annualreviews.org
Quantitative imaging instruments produce a large number of images of plankton and marine
snow, acquired in a controlled manner, from which the visual characteristics of individual …

Machine learning techniques to characterize functional traits of plankton from image data

EC Orenstein, SD Ayata, F Maps… - Limnology and …, 2022 - Wiley Online Library
Plankton imaging systems supported by automated classification and analysis have
improved ecologists' ability to observe aquatic ecosystems. Today, we are on the cusp of …

Marine snow morphology illuminates the evolution of phytoplankton blooms and determines their subsequent vertical export

E Trudnowska, L Lacour, M Ardyna, A Rogge… - Nature …, 2021 - nature.com
The organic carbon produced in the ocean's surface by phytoplankton is either passed
through the food web or exported to the ocean interior as marine snow. The rate and …

Mixoplankton and mixotrophy: future research priorities

NC Millette, RJ Gast, JY Luo, HV Moeller… - Journal of Plankton …, 2023 - academic.oup.com
Phago-mixotrophy, the combination of photoautotrophy and phagotrophy in mixoplankton,
organisms that can combine both trophic strategies, have gained increasing attention over …

Invertebrate traits, diversity and the vulnerability of groundwater ecosystems

GC Hose, A Chariton, MA Daam, T Di Lorenzo… - Functional …, 2022 - repositorio.ul.pt
Groundwater comprises the largest freshwater ecosystem on the planet. It has a distinct
regime of extreme, yet stable environmental conditions that have favoured the development …

Unlocking secrets of microbial ecotoxicology: Recent achievements and future challenges

J Hellal, L Barthelmebs, A Bérard… - FEMS Microbiology …, 2023 - academic.oup.com
Environmental pollution is one of the main challenges faced by humanity. By their ubiquity
and vast range of metabolic capabilities, microorganisms are affected by pollution with …

A global perspective on the functional responses of stream communities to flow intermittence

J Crabot, CP Mondy, P Usseglio‐Polatera, KM Fritz… - …, 2021 - Wiley Online Library
The current erosion of biodiversity is a major concern that threatens the ecological integrity
of ecosystems and the ecosystem services they provide. Due to global change, an …

Trait‐based approach using in situ copepod images reveals contrasting ecological patterns across an Arctic ice melt zone

L Vilgrain, F Maps, M Picheral, M Babin… - Limnology and …, 2021 - Wiley Online Library
Imaging techniques are increasingly used in ecology studies, producing vast quantities of
data. Inferring functional traits from individual images can provide original insights on …

Climate change threats to the global functional diversity of freshwater fish

L Scherer, HA Boom, V Barbarossa… - Global Change …, 2023 - Wiley Online Library
Climate change impacts on freshwater ecosystems and freshwater biodiversity show strong
spatial variability, highlighting the importance of a global perspective. While previous studies …

[HTML][HTML] Shortfalls in our understanding of the causes and consequences of functional and phylogenetic variation of freshwater communities across continents

J García-Girón, LM Bini, J Heino - Biological Conservation, 2023 - Elsevier
Freshwater ecosystems harbour a disproportionately high biodiversity relative to their area,
being also one of the most threatened ecosystem types worldwide. However, our capacity to …